Mercurial > repos > pjbriggs > amplicon_analysis_pipeline
changeset 22:eb7d118dd322 draft
planemo upload for repository https://github.com/pjbriggs/Amplicon_analysis-galaxy commit bae32168fbfd40305a4768b889a8e7689e5987e3-dirty
author | pjbriggs |
---|---|
date | Wed, 04 Jul 2018 06:56:48 -0400 |
parents | 092e39db5f59 |
children | 545f23776953 |
files | amplicon_analysis_pipeline.py |
diffstat | 1 files changed, 1 insertions(+), 1 deletions(-) [+] |
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--- a/amplicon_analysis_pipeline.py Wed Jul 04 05:57:44 2018 -0400 +++ b/amplicon_analysis_pipeline.py Wed Jul 04 06:56:48 2018 -0400 @@ -229,7 +229,7 @@ qiime_config_file = os.path.abspath("qiime_config") with open(qiime_config_file,'w') as qiime_config: # Set qiime_scripts_dir - qiime_config.write("qiime_scripts_dir: %s" % + qiime_config.write("qiime_scripts_dir\t%s" % os.path.dirname( find_executable("single_rarefaction.py"))) os.environ["QIIME_CONFIG_FP"] = qiime_config_file