Mercurial > repos > pitagora > imp_exp
diff imp_exp/export.xml @ 0:07d3e0871bb4 draft
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author | pitagora |
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date | Wed, 09 Jul 2014 04:48:09 -0400 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/imp_exp/export.xml Wed Jul 09 04:48:09 2014 -0400 @@ -0,0 +1,29 @@ +<tool id="export" name="Export" version="1.0.0"> +<description>to a Local File</description> +<command interpreter="perl">export.pl $symlink $dest $logfile +#for $i in $files +${i.file} ${i.name} +#end for +</command> +<inputs> + <param name="symlink" type="select" display="radio" label="Copy or symlink files?"> + <option value="0">COPY the files so I may delete the files from Galaxy</option> + <option value="1">SYMLINK the files; I will not delete the files from Galaxy</option> + </param> + <param name="dest" type="text" size='120' value="/home/galaxy/galaxy-work/" label="Destination folder" help="Must be writable by Galaxy user" /> + <repeat name="files" title="Files to export"> + <param name="file" type="data" format="data" label="File"/> + <param name="name" type="text" size='20' value="" label="Name" /> + </repeat> +</inputs> +<outputs> + <data name="logfile" format="txt" /> +</outputs> +<help> +**What it does** + +This tool allows staff to export files from Galaxy to a specified NFS path. + +The destination folder must be writable by the Galaxy user. It is suggested that you create a folder ~/dropbox and chmod 777 it. +</help> +</tool>