Mercurial > repos > pitagora > imp_exp
comparison imp_exp/export.xml @ 0:07d3e0871bb4 draft
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author | pitagora |
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date | Wed, 09 Jul 2014 04:48:09 -0400 |
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-1:000000000000 | 0:07d3e0871bb4 |
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1 <tool id="export" name="Export" version="1.0.0"> | |
2 <description>to a Local File</description> | |
3 <command interpreter="perl">export.pl $symlink $dest $logfile | |
4 #for $i in $files | |
5 ${i.file} ${i.name} | |
6 #end for | |
7 </command> | |
8 <inputs> | |
9 <param name="symlink" type="select" display="radio" label="Copy or symlink files?"> | |
10 <option value="0">COPY the files so I may delete the files from Galaxy</option> | |
11 <option value="1">SYMLINK the files; I will not delete the files from Galaxy</option> | |
12 </param> | |
13 <param name="dest" type="text" size='120' value="/home/galaxy/galaxy-work/" label="Destination folder" help="Must be writable by Galaxy user" /> | |
14 <repeat name="files" title="Files to export"> | |
15 <param name="file" type="data" format="data" label="File"/> | |
16 <param name="name" type="text" size='20' value="" label="Name" /> | |
17 </repeat> | |
18 </inputs> | |
19 <outputs> | |
20 <data name="logfile" format="txt" /> | |
21 </outputs> | |
22 <help> | |
23 **What it does** | |
24 | |
25 This tool allows staff to export files from Galaxy to a specified NFS path. | |
26 | |
27 The destination folder must be writable by the Galaxy user. It is suggested that you create a folder ~/dropbox and chmod 777 it. | |
28 </help> | |
29 </tool> |