Mercurial > repos > pitagora > gatk_1_6_pitagora
changeset 2:855b279dbdaf
commit
| author | pitagora <ryota.yamanaka@riken.jp> |
|---|---|
| date | Wed, 15 Apr 2015 18:52:30 +0900 |
| parents | 9b55ddff33e2 |
| children | 1a95dea5a2f0 |
| files | tool-data/gatk_beds.loc.sample tool-data/gatk_refgenomes.loc.sample tool-data/gatk_snps.loc.sample tool_data_table_conf.xml.sample |
| diffstat | 4 files changed, 20 insertions(+), 0 deletions(-) [+] |
line wrap: on
line diff
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool-data/gatk_beds.loc.sample Wed Apr 15 18:52:30 2015 +0900 @@ -0,0 +1,2 @@ +#<unique_build_id> <dbkey> <display_name> <file_path> +hg19 hg19 hg19 /disk/reference/gatk/truseq_exome_targeted_regions.hg19.bed
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool-data/gatk_refgenomes.loc.sample Wed Apr 15 18:52:30 2015 +0900 @@ -0,0 +1,2 @@ +#<unique_build_id> <dbkey> <display_name> <file_path> +hg19 hg19 hg19 /disk/reference/gatk/hg19.fa
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool-data/gatk_snps.loc.sample Wed Apr 15 18:52:30 2015 +0900 @@ -0,0 +1,2 @@ +#<unique_build_id> <dbkey> <display_name> <file_path> +hg19dbSnp hg19dbSnp hg19dbSnp /disk/reference/gatk/00-ALL.vcf
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool_data_table_conf.xml.sample Wed Apr 15 18:52:30 2015 +0900 @@ -0,0 +1,14 @@ +<tables> + <table name="gatk_beds" comment_char="#"> + <columns>value, dbkey, name, path</columns> + <file path="tool-data/gatk_beds.loc" /> + </table> + <table name="gatk_refgenomes" comment_char="#"> + <columns>value, dbkey, name, path</columns> + <file path="tool-data/gatk_refgenomes.loc" /> + </table> + <table name="gatk_snps" comment_char="#"> + <columns>value, dbkey, name, path</columns> + <file path="tool-data/gatk_snps.loc" /> + </table> +</tables>