Mercurial > repos > peterjc > seq_select_by_id
changeset 6:87086e8e9bb8 draft
Uploaded v0.0.6b, include the Biopython dependency
| author | peterjc |
|---|---|
| date | Mon, 29 Jul 2013 09:12:39 -0400 |
| parents | 99208a141ba8 |
| children | ddc359713c62 |
| files | tools/filters/repository_dependencies.xml tools/filters/seq_select_by_id.rst |
| diffstat | 2 files changed, 11 insertions(+), 4 deletions(-) [+] |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tools/filters/repository_dependencies.xml Mon Jul 29 09:12:39 2013 -0400 @@ -0,0 +1,6 @@ +<?xml version="1.0"?> +<repositories description="This requires Biopython as a dependency."> +<!-- Leave out the tool shed and revision to get the current + tool shed and latest revision at the time of upload --> +<repository changeset_revision="627c7b41b970" name="package_biopython_1_61" owner="biopython" toolshed="http://testtoolshed.g2.bx.psu.edu" /> +</repositories>
--- a/tools/filters/seq_select_by_id.rst Mon Jul 29 09:04:15 2013 -0400 +++ b/tools/filters/seq_select_by_id.rst Mon Jul 29 09:12:39 2013 -0400 @@ -82,14 +82,15 @@ For making the "Galaxy Tool Shed" http://toolshed.g2.bx.psu.edu/ tarball use the following command from the Galaxy root folder:: - $ tar -czf seq_select_by_id.tar.gz tools/filters/seq_select_by_id.* test-data/k12_ten_proteins.fasta test-data/k12_hypothetical.fasta test-data/k12_hypothetical.tabular + $ tar -czf seq_select_by_id.tar.gz tools/filters/seq_select_by_id.* tools/filters/repository_dependencies.xml test-data/k12_ten_proteins.fasta test-data/k12_hypothetical.fasta test-data/k12_hypothetical.tabular Check this worked:: $ tar -tzf seq_select_by_id.tar.gz - filter/seq_select_by_id.py - filter/seq_select_by_id.rst - filter/seq_select_by_id.xml + tools/filters/seq_select_by_id.py + tools/filters/seq_select_by_id.rst + tools/filter/seq_select_by_id.xml + tools/filters/repository_dependencies.xml test-data/k12_ten_proteins.fasta test-data/k12_hypothetical.fasta test-data/k12_hypothetical.tabular