Mercurial > repos > peterjc > seq_select_by_id
changeset 17:7e0fe10456c3 draft
planemo upload for repository https://github.com/peterjc/pico_galaxy/tools/seq_select_by_id commit cdab5c26fbae313e2df8884e22a0bfa4fc36b268
| author | peterjc |
|---|---|
| date | Wed, 13 May 2015 10:55:28 -0400 |
| parents | 9aa51c1a17cc |
| children | 67c0f7a86cf4 |
| files | tools/seq_select_by_id/README.rst tools/seq_select_by_id/seq_select_by_id.xml |
| diffstat | 2 files changed, 2 insertions(+), 1 deletions(-) [+] |
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--- a/tools/seq_select_by_id/README.rst Wed May 13 10:53:36 2015 -0400 +++ b/tools/seq_select_by_id/README.rst Wed May 13 10:55:28 2015 -0400 @@ -84,6 +84,7 @@ v0.0.11 - Use the ``format_source=...`` tag. - Reorder XML elements (internal change only). - Planemo for Tool Shed upload (``.shed.yml``, internal change only). + - Quote filenames in case of spaces (internal change only). ======= ======================================================================
--- a/tools/seq_select_by_id/seq_select_by_id.xml Wed May 13 10:53:36 2015 -0400 +++ b/tools/seq_select_by_id/seq_select_by_id.xml Wed May 13 10:55:28 2015 -0400 @@ -11,7 +11,7 @@ </stdio> <version_command interpreter="python">seq_select_by_id.py --version</version_command> <command interpreter="python"> -seq_select_by_id.py $input_tabular $column $input_file $input_file.ext $output_file +seq_select_by_id.py "$input_tabular" "$column" "$input_file" "$input_file.ext" "$output_file" </command> <inputs> <param name="input_file" type="data" format="fasta,qual,fastq,sff" label="Sequence file to select from" help="FASTA, QUAL, FASTQ, or SFF format." />