Mercurial > repos > peterjc > seq_select_by_id
changeset 9:27d45910c9be draft
Uploaded v0.0.7b, fix Biopython dependency setup
| author | peterjc |
|---|---|
| date | Fri, 13 Sep 2013 06:15:21 -0400 |
| parents | af9822194acc |
| children | 79ea9f30ac09 |
| files | tools/filters/seq_select_by_id.xml |
| diffstat | 1 files changed, 4 insertions(+), 3 deletions(-) [+] |
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--- a/tools/filters/seq_select_by_id.xml Thu Sep 12 11:19:37 2013 -0400 +++ b/tools/filters/seq_select_by_id.xml Fri Sep 13 06:15:21 2013 -0400 @@ -1,5 +1,9 @@ <tool id="seq_select_by_id" name="Select sequences by ID" version="0.0.6"> <description>from a tabular file</description> + <requirements> + <requirement type="package" version="1.61">biopython</requirement> + <requirement type="python-module">Bio</requirement> + </requirements> <version_command interpreter="python">seq_select_by_id.py --version</version_command> <command interpreter="python"> seq_select_by_id.py $input_tabular $column $input_file $input_file.ext $output_file @@ -35,9 +39,6 @@ <output name="output_file" file="k12_hypothetical.fasta" ftype="fasta" /> </test> </tests> - <requirements> - <requirement type="python-module">Bio</requirement> - </requirements> <help> **What it does**