Mercurial > repos > peterjc > seq_rename
changeset 22:484c44d6bc95 draft
planemo upload for repository https://github.com/peterjc/pico_galaxy/tree/master/tools/seq_rename commit 7496128ee9ef800fe780e545d2157da8a4f89d35-dirty
| author | peterjc |
|---|---|
| date | Thu, 11 May 2017 10:12:17 -0400 |
| parents | 5f87e696d49c |
| children | 5b8f19e9a616 |
| files | tools/seq_rename/README.rst tools/seq_rename/seq_rename.py |
| diffstat | 2 files changed, 7 insertions(+), 3 deletions(-) [+] |
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--- a/tools/seq_rename/README.rst Wed May 10 12:51:06 2017 -0400 +++ b/tools/seq_rename/README.rst Thu May 11 10:12:17 2017 -0400 @@ -84,6 +84,7 @@ - Python style updates (internal change only). v0.0.9 - Use ``<command detect_errors="aggressive">`` (internal change only). - Single quote command line arguments (internal change only). + - Python 3 compatible print function. ======= ======================================================================
--- a/tools/seq_rename/seq_rename.py Wed May 10 12:51:06 2017 -0400 +++ b/tools/seq_rename/seq_rename.py Thu May 11 10:12:17 2017 -0400 @@ -21,10 +21,13 @@ All rights reserved. See accompanying text file for licence details (MIT license). """ + +from __future__ import print_function + import sys if "-v" in sys.argv or "--version" in sys.argv: - print "v0.0.8" + print("v0.0.9") sys.exit(0) # Parse Command Line @@ -89,7 +92,7 @@ # Load the rename mappings rename = dict(parse_ids(tabular_file, old_column, new_column)) -print "Loaded %i ID mappings" % len(rename) +print("Loaded %i ID mappings" % len(rename)) # Rewrite the sequence file if seq_format.lower() == "sff": @@ -164,4 +167,4 @@ writer.close() reader.close() -print "Renamed %i out of %i records" % (renamed, count) +print("Renamed %i out of %i records" % (renamed, count))