Mercurial > repos > peterjc > seq_filter_by_id

changeset 8:d08224a6b131 draft

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Uploaded v0.0.6e, fixed Biopython dependency setup
author peterjc
date Fri, 13 Sep 2013 06:12:47 -0400
parents 40c30aafa816
children b1b4ad43caf1
files tools/filters/seq_filter_by_id.xml
diffstat 1 files changed, 4 insertions(+), 3 deletions(-) [+]
line wrap: on
line diff
--- a/tools/filters/seq_filter_by_id.xml	Thu Sep 12 11:17:01 2013 -0400
+++ b/tools/filters/seq_filter_by_id.xml	Fri Sep 13 06:12:47 2013 -0400
@@ -1,5 +1,9 @@
 <tool id="seq_filter_by_id" name="Filter sequences by ID" version="0.0.6">
 	<description>from a tabular file</description>
+	<requirements>
+		<requirement type="package" version="1.61">biopython</requirement>
+		<requirement type="python-module">Bio</requirement>
+	</requirements>
 	<version_command interpreter="python">seq_filter_by_id.py --version</version_command>
 	<command interpreter="python">
 seq_filter_by_id.py "$input_file" "$input_file.ext"
@@ -72,9 +76,6 @@
 			<output name="output_pos" file="k12_hypothetical.fasta" ftype="fasta" />
 		</test>
 	</tests>
-	<requirements>
-		<requirement type="python-module">Bio</requirement>
-	</requirements>
 	<help>
 
 **What it does**