Mercurial > repos > peterjc > seq_filter_by_id
changeset 22:a40eb15c7ad2 draft
planemo upload for repository https://github.com/peterjc/pico_galaxy/tree/master/tools/seq_filter_by_id commit 6d77d2fbb0d3ea1fd4db369073654b8a920c44bf-dirty
| author | peterjc |
|---|---|
| date | Fri, 21 Apr 2017 12:06:08 -0400 |
| parents | 0025bf338f06 |
| children | 2cf5aca943b4 |
| files | tools/seq_filter_by_id/README.rst tools/seq_filter_by_id/seq_filter_by_id.xml tools/seq_filter_by_id/tool_dependencies.xml |
| diffstat | 3 files changed, 6 insertions(+), 5 deletions(-) [+] |
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--- a/tools/seq_filter_by_id/README.rst Thu Feb 09 11:26:42 2017 -0500 +++ b/tools/seq_filter_by_id/README.rst Fri Apr 21 12:06:08 2017 -0400 @@ -1,7 +1,7 @@ Galaxy tool to filter FASTA, FASTQ or SFF sequences by ID ========================================================= -This tool is copyright 2010-2015 by Peter Cock, The James Hutton Institute +This tool is copyright 2010-2017 by Peter Cock, The James Hutton Institute (formerly SCRI, Scottish Crop Research Institute), UK. All rights reserved. See the licence text below. @@ -91,6 +91,7 @@ (internal change only). v0.2.4 - Corrected error message wording. v0.2.5 - Ignore empty names, common in R output (Gildas Le Corguillé). +v0.2.6 - Depends on Biopython 1.67 via legacy Tool Shed package or bioconda. ======= ======================================================================
--- a/tools/seq_filter_by_id/seq_filter_by_id.xml Thu Feb 09 11:26:42 2017 -0500 +++ b/tools/seq_filter_by_id/seq_filter_by_id.xml Fri Apr 21 12:06:08 2017 -0400 @@ -1,7 +1,7 @@ -<tool id="seq_filter_by_id" name="Filter sequences by ID" version="0.2.5"> +<tool id="seq_filter_by_id" name="Filter sequences by ID" version="0.2.6"> <description>from a tabular file</description> <requirements> - <requirement type="package" version="1.64">biopython</requirement> + <requirement type="package" version="1.67">biopython</requirement> </requirements> <stdio> <!-- Anything other than zero is an error -->
--- a/tools/seq_filter_by_id/tool_dependencies.xml Thu Feb 09 11:26:42 2017 -0500 +++ b/tools/seq_filter_by_id/tool_dependencies.xml Fri Apr 21 12:06:08 2017 -0400 @@ -1,6 +1,6 @@ <?xml version="1.0"?> <tool_dependency> - <package name="biopython" version="1.64"> - <repository changeset_revision="bc1d7fa4ad08" name="package_biopython_1_64" owner="biopython" toolshed="https://testtoolshed.g2.bx.psu.edu" /> + <package name="biopython" version="1.67"> + <repository changeset_revision="fc45a61abc2f" name="package_biopython_1_67" owner="biopython" toolshed="https://testtoolshed.g2.bx.psu.edu" /> </package> </tool_dependency>