Mercurial > repos > peterjc > seq_composition
changeset 5:d8afdac33a96 draft
planemo upload for repository https://github.com/peterjc/pico_galaxy/tree/master/tools/seq_composition commit 6d77d2fbb0d3ea1fd4db369073654b8a920c44bf-dirty
| author | peterjc |
|---|---|
| date | Fri, 21 Apr 2017 12:05:43 -0400 |
| parents | b7b9f5c5d682 |
| children | ff0f730341a0 |
| files | tools/seq_composition/README.rst tools/seq_composition/seq_composition.xml tools/seq_composition/tool_dependencies.xml |
| diffstat | 3 files changed, 4 insertions(+), 4 deletions(-) [+] |
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--- a/tools/seq_composition/README.rst Wed Feb 01 09:59:21 2017 -0500 +++ b/tools/seq_composition/README.rst Fri Apr 21 12:05:43 2017 -0400 @@ -61,6 +61,7 @@ v0.0.2 - Reorder XML elements (internal change only). - Planemo for Tool Shed upload (``.shed.yml``, internal change only). v0.0.3 - Python style updates (internal change only). + - Depends on Biopython 1.67 via legacy Tool Shed package or bioconda. ======= ======================================================================
--- a/tools/seq_composition/seq_composition.xml Wed Feb 01 09:59:21 2017 -0500 +++ b/tools/seq_composition/seq_composition.xml Fri Apr 21 12:05:43 2017 -0400 @@ -1,8 +1,7 @@ <tool id="seq_composition" name="Sequence composition" version="0.0.3"> <description>Count bases or amino-acids</description> <requirements> - <requirement type="package" version="1.64">biopython</requirement> - <requirement type="python-module">Bio</requirement> + <requirement type="package" version="1.67">biopython</requirement> </requirements> <stdio> <!-- Anything other than zero is an error -->
--- a/tools/seq_composition/tool_dependencies.xml Wed Feb 01 09:59:21 2017 -0500 +++ b/tools/seq_composition/tool_dependencies.xml Fri Apr 21 12:05:43 2017 -0400 @@ -1,6 +1,6 @@ <?xml version="1.0"?> <tool_dependency> - <package name="biopython" version="1.64"> - <repository changeset_revision="bc1d7fa4ad08" name="package_biopython_1_64" owner="biopython" toolshed="https://testtoolshed.g2.bx.psu.edu" /> + <package name="biopython" version="1.67"> + <repository changeset_revision="fc45a61abc2f" name="package_biopython_1_67" owner="biopython" toolshed="https://testtoolshed.g2.bx.psu.edu" /> </package> </tool_dependency>