Mercurial > repos > peterjc > rxlr_venn_workflow

comparison README.txt @ 3:65d174589251 draft

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Uploaded v0.0.1c, repository_dependencies.xml with implicit current toolshed & latest revision
author peterjc
date Mon, 08 Jul 2013 11:21:05 -0400
parents e99b1bbe44f8
children 41d8f46e0343
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2:e99b1bbe44f8 3:65d174589251
30 ============ 30 ============
31 31
32 This workflow is available on the main Galaxy Tool Shed: 32 This workflow is available on the main Galaxy Tool Shed:
33 http://toolshed.g2.bx.psu.edu/view/peterjc/rxlr_venn_workflow 33 http://toolshed.g2.bx.psu.edu/view/peterjc/rxlr_venn_workflow
34 34
35 Test releases (which should not be used) are on the Test Tool Shed:
36 http://testtoolshed.g2.bx.psu.edu/view/peterjc/rxlr_venn_workflow
37
35 Development is being done on github here: 38 Development is being done on github here:
36 https://github.com/peterjc/picobio/tree/master/galaxy_workflows/rxlr_venn_workflow 39 https://github.com/peterjc/picobio/tree/master/galaxy_workflows/rxlr_venn_workflow
37 40
38 41
39 Dependencies 42 Dependencies
45 * http://toolshed.g2.bx.psu.edu/view/peterjc/venn_list 48 * http://toolshed.g2.bx.psu.edu/view/peterjc/venn_list
46 49
47 However, at the time of writing those Galaxy tools have their own dependencies 50 However, at the time of writing those Galaxy tools have their own dependencies
48 required for this workflow which require manual installation (SignalP v3.0, 51 required for this workflow which require manual installation (SignalP v3.0,
49 HMMER v2.0, and the R/Bioconductor package limma). 52 HMMER v2.0, and the R/Bioconductor package limma).
53
54
55 Developers
56 ==========
57
58 This workflow is under source code control here:
59
60 https://github.com/peterjc/picobio/tree/master/galaxy_workflows/rxlr_venn_workflow
61
62 To prepare the tar-ball for uploading to the Tool Shed, I use this:
63
64 $ tar -cf rxlr_venn_workflow.tar.gz README.txt repository_dependencies.xml rxlr_venn_workflow.ga
65
66 Check this,
67
68 $ tar -tzf rxlr_venn_workflow.tar.gz
69 README.txt
70 repository_dependencies.xml
71 rxlr_venn_workflow.ga