Mercurial > repos > peterjc > ncbi_blast_plus

changeset 18:cc1416954958 draft

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Uploaded v0.0.20 preview 9, correct relative path in dependency auto-install.
author peterjc
date Mon, 27 May 2013 11:42:33 -0400
parents bb81d3afa28d
children c1a6e5aefee0
files tools/ncbi_blast_plus/repository_dependencies.xml tools/ncbi_blast_plus/tool_dependencies.xml
diffstat 2 files changed, 4 insertions(+), 3 deletions(-) [+]
line wrap: on
line diff
--- a/tools/ncbi_blast_plus/repository_dependencies.xml	Thu May 23 04:47:28 2013 -0400
+++ b/tools/ncbi_blast_plus/repository_dependencies.xml	Mon May 27 11:42:33 2013 -0400
@@ -1,5 +1,5 @@
 <?xml version="1.0"?>
 <repositories description="This requires the BLAST datatype definitions (e.g. the BLAST XML format).">
-
+<!-- Revision 4:f9a7783ed7b6 on the main (and test) tool shed is v0.0.14 which added BLAST databases -->
 <repository changeset_revision="f9a7783ed7b6" name="blast_datatypes" owner="devteam" toolshed="http://testtoolshed.g2.bx.psu.edu" />
-</repositories>
\ No newline at end of file
+</repositories>
--- a/tools/ncbi_blast_plus/tool_dependencies.xml	Thu May 23 04:47:28 2013 -0400
+++ b/tools/ncbi_blast_plus/tool_dependencies.xml	Mon May 27 11:42:33 2013 -0400
@@ -5,7 +5,8 @@
             <actions>
                 <action type="download_by_url">ftp://ftp.ncbi.nlm.nih.gov/blast/executables/blast+/2.2.26/ncbi-blast-2.2.26+-x64-linux.tar.gz</action>
                 <action type="move_directory_files">
-                    <source_directory>ncbi-blast-2.2.26+/bin</source_directory>
+                    <!-- Galaxy will have changed directory into ncbi-blast-2.2.26+/ -->		  
+                    <source_directory>bin</source_directory>
                     <destination_directory>$INSTALL_DIR</destination_directory>
                 </action>
                 <action type="set_environment">