annotate test-data/segmasker_four_human.maskinfo-asn1 @ 43:d1330f50deb9 draft

Uploaded v0.1.0 preview 6, include missing new test file
author peterjc
date Thu, 27 Feb 2014 06:43:21 -0500
parents f83e5d79b6ab
children
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f83e5d79b6ab Uploaded v0.1.0 preview 3, adds a missing test file & more tests for makeblastdb
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1 Blast-db-mask-info ::= {
f83e5d79b6ab Uploaded v0.1.0 preview 3, adds a missing test file & more tests for makeblastdb
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2 algo-id 1,
f83e5d79b6ab Uploaded v0.1.0 preview 3, adds a missing test file & more tests for makeblastdb
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3 algo-program seg,
f83e5d79b6ab Uploaded v0.1.0 preview 3, adds a missing test file & more tests for makeblastdb
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4 algo-options "window=12; locut=2.2; hicut=2.5",
f83e5d79b6ab Uploaded v0.1.0 preview 3, adds a missing test file & more tests for makeblastdb
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5 masks {
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6 masks {
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