Mercurial > repos > peterjc > ncbi_blast_plus

annotate test-data/segmasker_four_human.fasta @ 43:d1330f50deb9 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Uploaded v0.1.0 preview 6, include missing new test file
author peterjc
date Thu, 27 Feb 2014 06:43:21 -0500
parents f83e5d79b6ab
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
40
f83e5d79b6ab Uploaded v0.1.0 preview 3, adds a missing test file & more tests for makeblastdb
peterjc
parents:
diff changeset
1 >sp|Q9BS26|ERP44_HUMAN Endoplasmic reticulum resident protein 44 OS=Homo sapiens GN=ERP44 PE=1 SV=1
f83e5d79b6ab Uploaded v0.1.0 preview 3, adds a missing test file & more tests for makeblastdb
peterjc
parents:
diff changeset
2 MHPAVFlslpdlrcsllllVTWVFTPVTTEITSLDTENIDEILNNADVALVNFYADWCRF
f83e5d79b6ab Uploaded v0.1.0 preview 3, adds a missing test file & more tests for makeblastdb
peterjc
parents:
diff changeset
3 SQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQHSDIAQRYRISKYPTLKLFRNGMMMK
f83e5d79b6ab Uploaded v0.1.0 preview 3, adds a missing test file & more tests for makeblastdb
peterjc
parents:
diff changeset
4 REYRGQRSVKALADYIRQQKSDPIQEIRDLAEITTLDRSKRNIIGYFEQKDSDNYRVFER
f83e5d79b6ab Uploaded v0.1.0 preview 3, adds a missing test file & more tests for makeblastdb
peterjc
parents:
diff changeset
5 VANILHDDCAFLSAFGDVSKPERYSGDNIIYKPPGHSAPDMVYLGAMTNFDVTYNWIQDK
f83e5d79b6ab Uploaded v0.1.0 preview 3, adds a missing test file & more tests for makeblastdb
peterjc
parents:
diff changeset
6 CVPLVREITFENGEELTEEGLPFLILFHMKEDTESLEIFQNEVARQLISEKGTINFLHAD
f83e5d79b6ab Uploaded v0.1.0 preview 3, adds a missing test file & more tests for makeblastdb
peterjc
parents:
diff changeset
7 CDKFRHPLLHIQKTPADCPVIAIDSFRHMYVFGDFKDVLIPGKLKQFVFDLHSGKLHREF
f83e5d79b6ab Uploaded v0.1.0 preview 3, adds a missing test file & more tests for makeblastdb
peterjc
parents:
diff changeset
8 HHGPDPTDTAPGEQAQDVASSPPESSFQKLAPSEYRYTLLRDRDEL
f83e5d79b6ab Uploaded v0.1.0 preview 3, adds a missing test file & more tests for makeblastdb
peterjc
parents:
diff changeset
9 >sp|Q9NSY1|BMP2K_HUMAN BMP-2-inducible protein kinase OS=Homo sapiens GN=BMP2K PE=1 SV=2
f83e5d79b6ab Uploaded v0.1.0 preview 3, adds a missing test file & more tests for makeblastdb
peterjc
parents:
diff changeset
10 MKKFSRMPKSEggsgggaagggaggagagagcgsggssvgvrvfavgRHQVTLEESLAEG
f83e5d79b6ab Uploaded v0.1.0 preview 3, adds a missing test file & more tests for makeblastdb
peterjc
parents:
diff changeset
11 GFSTVFLVRTHGGIRCALKRMYVNNMPDLNVCKREITIMKELSGHKNIVGYLDCAVNSIS
f83e5d79b6ab Uploaded v0.1.0 preview 3, adds a missing test file & more tests for makeblastdb
peterjc
parents:
diff changeset
12 DNVWEVLILMEYCRAGQVVNQMNKKLQTGFTEPEVLQIFCDTCEAVARLHQCKTPIIHRD
f83e5d79b6ab Uploaded v0.1.0 preview 3, adds a missing test file & more tests for makeblastdb
peterjc
parents:
diff changeset
13 LKVENILLNDGGNYVLCDFGSATNKFLNPQKDGVNVVEEEIKKYTTLSYRAPEMINLYGG
f83e5d79b6ab Uploaded v0.1.0 preview 3, adds a missing test file & more tests for makeblastdb
peterjc
parents:
diff changeset
14 KPITTKADIWALGCLLYKLCFFTLPFGESQVAICDGNFTIPDNSRYSRNIHCLIRFMLEP
f83e5d79b6ab Uploaded v0.1.0 preview 3, adds a missing test file & more tests for makeblastdb
peterjc
parents:
diff changeset
15 DPEHRPDIFQVSYFAFKFAKKDCPVsninnssiPSALPEPMTASEAAARKSQIKARITDT
f83e5d79b6ab Uploaded v0.1.0 preview 3, adds a missing test file & more tests for makeblastdb
peterjc
parents:
diff changeset
16 IGPTETSIAPRQRPKANSATTATPSVLTIQSSATPVKVLAPGEFGNHRPKGALRPGNGPE
f83e5d79b6ab Uploaded v0.1.0 preview 3, adds a missing test file & more tests for makeblastdb
peterjc
parents:
diff changeset
17 Illgqgppqqppqqhrvlqqlqqgdwrlqqlhlqhrhphqqqqqqqqqqqqqqqqqqqqq
f83e5d79b6ab Uploaded v0.1.0 preview 3, adds a missing test file & more tests for makeblastdb
peterjc
parents:
diff changeset
18 qqqqqqhhhhhhhhllqDAYMqqyqhatqqqqmlqqqFLMHSVYQPQPSASQYPTMmpqy
f83e5d79b6ab Uploaded v0.1.0 preview 3, adds a missing test file & more tests for makeblastdb
peterjc
parents:
diff changeset
19 qqaffqqqmlaqhqpsqqqASPEYLTSPQEFSPALVSYTSSLPAQVGTIMDSSYSANRSV
f83e5d79b6ab Uploaded v0.1.0 preview 3, adds a missing test file & more tests for makeblastdb
peterjc
parents:
diff changeset
20 ADKEAIANFTNQKNISNPPDMSGWNPFGEDNFSKLTeeelldrefdllrSNRLEERASSD
f83e5d79b6ab Uploaded v0.1.0 preview 3, adds a missing test file & more tests for makeblastdb
peterjc
parents:
diff changeset
21 KNVDSLSAPHNHPPEDPFGSVPFISHSGSPEKKAEHSSINQENGTANPIKNGKTSPASKD
f83e5d79b6ab Uploaded v0.1.0 preview 3, adds a missing test file & more tests for makeblastdb
peterjc
parents:
diff changeset
22 QRTGKKTSVQGQVQKGNdesesdfesdppspksseeeeqddeeVLQGEQGDFNDDDTEPE
f83e5d79b6ab Uploaded v0.1.0 preview 3, adds a missing test file & more tests for makeblastdb
peterjc
parents:
diff changeset
23 NLGHRPLLMdsedeeeeekhssdsdyeQAKAKYSDMSSVYRDRSGSGPTQDLNTILLTSA
f83e5d79b6ab Uploaded v0.1.0 preview 3, adds a missing test file & more tests for makeblastdb
peterjc
parents:
diff changeset
24 QLSSDVAVETPKQEFDVFGAVPFFAVRAQQPQQEKNEKNLPQHRFPAAGLEQEEFDVFTK
f83e5d79b6ab Uploaded v0.1.0 preview 3, adds a missing test file & more tests for makeblastdb
peterjc
parents:
diff changeset
25 APFSKKVNVQECHAVGPEAHTIPGYPKSVDVFGSTPFQPFLTSTSKSESNEDLFGLVPFD
f83e5d79b6ab Uploaded v0.1.0 preview 3, adds a missing test file & more tests for makeblastdb
peterjc
parents:
diff changeset
26 EITGSQQQKVkqrslqklssrqrrTKQDMSKSNGKRHHGtptstkktlkptYRTPERARR
f83e5d79b6ab Uploaded v0.1.0 preview 3, adds a missing test file & more tests for makeblastdb
peterjc
parents:
diff changeset
27 HKKVGRRDSQSSNEFLTISDSKENISVALTDGKDRGNVLQPEESLLDPFGAKPFHSPDLS
f83e5d79b6ab Uploaded v0.1.0 preview 3, adds a missing test file & more tests for makeblastdb
peterjc
parents:
diff changeset
28 WHPPHQGLSDIRADHNTVLPGRPRQNSLHGSFHSADVLKMDDFGAVPFTELVVQSITPHQ
f83e5d79b6ab Uploaded v0.1.0 preview 3, adds a missing test file & more tests for makeblastdb
peterjc
parents:
diff changeset
29 SQQSQPVELDPFGAAPFPSKQ
f83e5d79b6ab Uploaded v0.1.0 preview 3, adds a missing test file & more tests for makeblastdb
peterjc
parents:
diff changeset
30 >sp|P06213|INSR_HUMAN Insulin receptor OS=Homo sapiens GN=INSR PE=1 SV=4
f83e5d79b6ab Uploaded v0.1.0 preview 3, adds a missing test file & more tests for makeblastdb
peterjc
parents:
diff changeset
31 MATggrrgaaaapllvavaalllgaagHLYPGEVCPGMDIRNNLTRLHELENCSVIEGHL
f83e5d79b6ab Uploaded v0.1.0 preview 3, adds a missing test file & more tests for makeblastdb
peterjc
parents:
diff changeset
32 QILLMFKTRPEDFRDLSFPKLIMITDYLLLFRVYGLESLKDLFPNLTVIRGSRLFFNYAL
f83e5d79b6ab Uploaded v0.1.0 preview 3, adds a missing test file & more tests for makeblastdb
peterjc
parents:
diff changeset
33 VIFEMVHLKELGLYNLMNITRGSVRIEKNNELCYLATIDWSRILDSVEDNYIVLNKDDNE
f83e5d79b6ab Uploaded v0.1.0 preview 3, adds a missing test file & more tests for makeblastdb
peterjc
parents:
diff changeset
34 ECGDICPGTAKGKTNCPATVINGQFVERCWTHSHCQKVCPTICKSHGCTAEGLCCHSECL
f83e5d79b6ab Uploaded v0.1.0 preview 3, adds a missing test file & more tests for makeblastdb
peterjc
parents:
diff changeset
35 GNCSQPDDPTKCVACRNFYLDGRCVETCPPPYYHFQDWRCVNFSFCQDLHHKCKNSRRQG
f83e5d79b6ab Uploaded v0.1.0 preview 3, adds a missing test file & more tests for makeblastdb
peterjc
parents:
diff changeset
36 CHQYVIHNNKCIPECPSGYTMNSSNLLCTPCLGPCPKVCHLLEGEKTIDSVTSAQELRGC
f83e5d79b6ab Uploaded v0.1.0 preview 3, adds a missing test file & more tests for makeblastdb
peterjc
parents:
diff changeset
37 TVINGSLIINIRggnnlaaeleanlglieeiSGYLKIRRSYALVSLSFFRKLRLIRGETL
f83e5d79b6ab Uploaded v0.1.0 preview 3, adds a missing test file & more tests for makeblastdb
peterjc
parents:
diff changeset
38 EIGNYSFYALDNQNLRQLWDWSKHNLTITQGKLFFHYNPKLCLSEIHKMEEVSGTKGRQE
f83e5d79b6ab Uploaded v0.1.0 preview 3, adds a missing test file & more tests for makeblastdb
peterjc
parents:
diff changeset
39 RNDIALKTNGDQASCENELLKFSYIRTSFDKILLRWEPYWPPDFRDLLGFMLFYKEAPYQ
f83e5d79b6ab Uploaded v0.1.0 preview 3, adds a missing test file & more tests for makeblastdb
peterjc
parents:
diff changeset
40 NVTEFDGQDACGSNSWTVVDIDPPLRSNDPKSQNHPGWLMRGLKPWTQYAIFVKTLVTFS
f83e5d79b6ab Uploaded v0.1.0 preview 3, adds a missing test file & more tests for makeblastdb
peterjc
parents:
diff changeset
41 DERRTYGAKSDIIYVQTDATNPSVPLDPISVSNSSSQIILKWKPPSDPNGNITHYLVFWE
f83e5d79b6ab Uploaded v0.1.0 preview 3, adds a missing test file & more tests for makeblastdb
peterjc
parents:
diff changeset
42 RQAEDSELFELDYCLKGLKLPSRTWSPPFESEDSQKHNQSEYEDSAGECCSCPKTDSQIL
f83e5d79b6ab Uploaded v0.1.0 preview 3, adds a missing test file & more tests for makeblastdb
peterjc
parents:
diff changeset
43 KELEESSFRKTFEDYLHNVVFVPRKTSSGTGAEDPRPSRKRRSLGDvgnvtvavptvaaf
f83e5d79b6ab Uploaded v0.1.0 preview 3, adds a missing test file & more tests for makeblastdb
peterjc
parents:
diff changeset
44 pntsstsvptspEEHRPFEKVVNKESLVISGLRHFTGYRIELQACNQDTPEERCSVAAYV
f83e5d79b6ab Uploaded v0.1.0 preview 3, adds a missing test file & more tests for makeblastdb
peterjc
parents:
diff changeset
45 SARTMPEAKADDIVGPVTHEIFENNVVHLMWQEPKEPNGLIVLYEVSYRRYGDEELHLCV
f83e5d79b6ab Uploaded v0.1.0 preview 3, adds a missing test file & more tests for makeblastdb
peterjc
parents:
diff changeset
46 SRKHFALERGCRLRGLSPGNYSVRIRATSLAGNGSWTEPTYFYVTDYLDVPSNIAKIIIG
f83e5d79b6ab Uploaded v0.1.0 preview 3, adds a missing test file & more tests for makeblastdb
peterjc
parents:
diff changeset
47 PLIFVFLFSVVIGSIYLFLRKRQPDGPLGPLYASSNPEYLSASDVFPCSVYVPDEWEVSR
f83e5d79b6ab Uploaded v0.1.0 preview 3, adds a missing test file & more tests for makeblastdb
peterjc
parents:
diff changeset
48 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKG
f83e5d79b6ab Uploaded v0.1.0 preview 3, adds a missing test file & more tests for makeblastdb
peterjc
parents:
diff changeset
49 FTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMA
f83e5d79b6ab Uploaded v0.1.0 preview 3, adds a missing test file & more tests for makeblastdb
peterjc
parents:
diff changeset
50 AEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV
f83e5d79b6ab Uploaded v0.1.0 preview 3, adds a missing test file & more tests for makeblastdb
peterjc
parents:
diff changeset
51 RWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDN
f83e5d79b6ab Uploaded v0.1.0 preview 3, adds a missing test file & more tests for makeblastdb
peterjc
parents:
diff changeset
52 CPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEVSFFHSEENKAPeseeleme
f83e5d79b6ab Uploaded v0.1.0 preview 3, adds a missing test file & more tests for makeblastdb
peterjc
parents:
diff changeset
53 fedmeNVPLDRSSHCQREEAGGRDGGSSLGFKRSYEEHIPYTHMNGGKKNGRILTLPRSN
f83e5d79b6ab Uploaded v0.1.0 preview 3, adds a missing test file & more tests for makeblastdb
peterjc
parents:
diff changeset
54 PS
f83e5d79b6ab Uploaded v0.1.0 preview 3, adds a missing test file & more tests for makeblastdb
peterjc
parents:
diff changeset
55 >sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1
f83e5d79b6ab Uploaded v0.1.0 preview 3, adds a missing test file & more tests for makeblastdb
peterjc
parents:
diff changeset
56 MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLY
f83e5d79b6ab Uploaded v0.1.0 preview 3, adds a missing test file & more tests for makeblastdb
peterjc
parents:
diff changeset
57 VTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLG
f83e5d79b6ab Uploaded v0.1.0 preview 3, adds a missing test file & more tests for makeblastdb
peterjc
parents:
diff changeset
58 GEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIP
f83e5d79b6ab Uploaded v0.1.0 preview 3, adds a missing test file & more tests for makeblastdb
peterjc
parents:
diff changeset
59 EGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVkeaaaqqqes
f83e5d79b6ab Uploaded v0.1.0 preview 3, adds a missing test file & more tests for makeblastdb
peterjc
parents:
diff changeset
60 attqkaeKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAI
f83e5d79b6ab Uploaded v0.1.0 preview 3, adds a missing test file & more tests for makeblastdb
peterjc
parents:
diff changeset
61 YNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEASATVSKTETSQVAPA