Mercurial > repos > peterjc > mira4_assembler
comparison tools/mira4/tool_dependencies.xml @ 9:302d13490b23 draft
Uploaded v0.0.2 preview 1, BAM output
| author | peterjc |
|---|---|
| date | Thu, 28 Nov 2013 05:07:59 -0500 |
| parents | 2ab1d6f6a8ec |
| children | 79759fdec6cb |
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| 8:2ab1d6f6a8ec | 9:302d13490b23 |
|---|---|
| 1 <?xml version="1.0"?> | 1 <?xml version="1.0"?> |
| 2 <tool_dependency> | 2 <tool_dependency> |
| 3 <package name="samtools" version="0.1.19"> | |
| 4 <repository changeset_revision="54195f1d4b0f" name="package_samtools_0_1_19" owner="iuc" toolshed="http://testtoolshed.g2.bx.psu.edu" /> | |
| 5 </package> | |
| 3 <package name="MIRA" version="4.0"> | 6 <package name="MIRA" version="4.0"> |
| 4 <install version="1.0"> | 7 <install version="1.0"> |
| 5 <actions> | 8 <actions> |
| 6 <action type="download_by_url">https://downloads.sourceforge.net/project/mira-assembler/MIRA/stable/mira_4.0rc4_linux-gnu_x86_64_static.tar.bz2</action> | 9 <action type="download_by_url">https://downloads.sourceforge.net/project/mira-assembler/MIRA/stable/mira_4.0rc4_linux-gnu_x86_64_static.tar.bz2</action> |
| 7 <action type="move_directory_files"> | 10 <action type="move_directory_files"> |
| 8 <source_directory>bin</source_directory> | 11 <source_directory>bin</source_directory> |
| 9 <destination_directory>$INSTALL_DIR</destination_directory> | 12 <destination_directory>$INSTALL_DIR</destination_directory> |
| 10 </action> | 13 </action> |
| 11 <action type="set_environment"> | 14 <action type="set_environment"> |
| 12 <environment_variable name="MIRA4" action="set_to">$INSTALL_DIR</environment_variable> | 15 <environment_variable action="set_to" name="MIRA4">$INSTALL_DIR</environment_variable> |
| 13 </action> | 16 </action> |
| 14 </actions> | 17 </actions> |
| 15 </install> | 18 </install> |
| 16 <readme> | 19 <readme> |
| 17 Downloads MIRA v4.0 from Sourceforge, requesting Bastien's precompiled binaries | 20 Downloads MIRA v4.0 from Sourceforge, requesting Bastien's precompiled binaries |
| 21 http://chevreux.org/projects_mira.html | 24 http://chevreux.org/projects_mira.html |
| 22 http://sourceforge.net/projects/mira-assembler/ | 25 http://sourceforge.net/projects/mira-assembler/ |
| 23 </readme> | 26 </readme> |
| 24 </package> | 27 </package> |
| 25 </tool_dependency> | 28 </tool_dependency> |
| 26 |