Mercurial > repos > peterjc > clinod

changeset 4:07f2d99bc2de draft

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Uploaded v0.0.5 take 4, tweak install order
author peterjc
date Thu, 09 May 2013 05:32:11 -0400
parents a66a914c39b5
children d9762448b921
files tools/clinod/tool_dependencies.xml
diffstat 1 files changed, 4 insertions(+), 3 deletions(-) [+]
line wrap: on
line diff
--- a/tools/clinod/tool_dependencies.xml	Tue May 07 10:32:03 2013 -0400
+++ b/tools/clinod/tool_dependencies.xml	Thu May 09 05:32:11 2013 -0400
@@ -3,15 +3,16 @@
     <package name="clinod" version="1.3">
         <install version="1.0">
             <actions>
+                <!-- Set environment variable $CLINOD so wrapper knows where to look -->
+                <action type="set_environment">
+                    <environment_variable name="CLINOD" action="set_to">$INSTALL_DIR</environment_variable>
+                </action>
                 <!-- clinod requires the SNNS Batch Interpreter v1.0 executable -->
                 <action type="download_by_url">http://www.ra.cs.uni-tuebingen.de/downloads/SNNS/SNNSv4.3.tar.gz</action>
                 <action type="move_file"><source>tools/bin/x86_64-pc-unknown-linux-gnuoldld/batchman</source><destination>$INSTALL_DIR/</destination></action>
                 <!-- clinod itself is just a JAR file -->
                 <action type="download_by_url">http://www.compbio.dundee.ac.uk/nod/downloads/clinod-1.3.jar</action>
                 <action type="move_file"><source>clinod-1.3.jar</source><destination>$INSTALL_DIR</destination></action>
-                <action type="set_environment">
-                    <environment_variable name="CLINOD" action="set_to">$INSTALL_DIR</environment_variable>
-                </action>
             </actions>
         </install>
         <readme>