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changeset 10:04aed2f80910 draft

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Uploaded v0.0.5 take 10, use four threads rather than eight to run on Galaxy's test cluster.
author peterjc
date Sat, 25 May 2013 09:24:02 -0400
parents c4f503750a44
children deb6cb2db22b
files tools/clinod/clinod.xml
diffstat 1 files changed, 1 insertions(+), 1 deletions(-) [+]
line wrap: on
line diff
--- a/tools/clinod/clinod.xml	Thu May 23 04:34:02 2013 -0400
+++ b/tools/clinod/clinod.xml	Sat May 25 09:24:02 2013 -0400
@@ -7,7 +7,7 @@
     <command>
 ##The Galaxy Tool Shed installation should define $CLINOD to point at folder
 ##containing both clinod-1.3.jar and the batchman binary:
-java -jar \$CLINOD/clinod-1.3.jar -in="$fasta_file" -out="$tabular_file" -t=8 -f=MEDIUM_TAB -nonols -clean_sequence
+java -jar \$CLINOD/clinod-1.3.jar -in="$fasta_file" -out="$tabular_file" -t=4 -f=MEDIUM_TAB -nonols -clean_sequence
 ##I want the number of threads to be a Galaxy config option...
 ##TODO - Make the -clean_sequence argument a parameter?
     </command>