Mercurial > repos > peterjc > blastxml_to_top_descr
annotate test-data/blastp_four_human_vs_rhodopsin.xml @ 29:dcf6b7390551 draft default tip
"planemo upload for repository https://github.com/peterjc/galaxy_blast/tree/master/tools/blastxml_to_top_descr commit 3ac00a9f99a93cbc8a6c136a302e7fbb17da8f71-dirty"
author | peterjc |
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date | Thu, 10 Sep 2020 14:00:38 +0000 |
parents | ca37d05fade9 |
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rev | line source |
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1 | 1 <?xml version="1.0"?> |
2 <!DOCTYPE BlastOutput PUBLIC "-//NCBI//NCBI BlastOutput/EN" "http://www.ncbi.nlm.nih.gov/dtd/NCBI_BlastOutput.dtd"> | |
3 <BlastOutput> | |
4 <BlastOutput_program>blastp</BlastOutput_program> | |
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dcf6b7390551
"planemo upload for repository https://github.com/peterjc/galaxy_blast/tree/master/tools/blastxml_to_top_descr commit 3ac00a9f99a93cbc8a6c136a302e7fbb17da8f71-dirty"
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5 <BlastOutput_version>BLASTP 2.10.1+</BlastOutput_version> |
1 | 6 <BlastOutput_reference>Stephen F. Altschul, Thomas L. Madden, Alejandro A. Sch&auml;ffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.</BlastOutput_reference> |
7 <BlastOutput_db></BlastOutput_db> | |
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planemo upload for repository https://github.com/peterjc/galaxy_blast/tree/master/tools/blastxml_to_top_descr commit 3f6b5c953d522a724bbcd403bcb86f1e2757a556-dirty
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8 <BlastOutput_query-ID>Q9BS26</BlastOutput_query-ID> |
1 | 9 <BlastOutput_query-def>Endoplasmic reticulum resident protein 44 OS=Homo sapiens GN=ERP44 PE=1 SV=1</BlastOutput_query-def> |
10 <BlastOutput_query-len>406</BlastOutput_query-len> | |
11 <BlastOutput_param> | |
12 <Parameters> | |
13 <Parameters_matrix>BLOSUM62</Parameters_matrix> | |
14 <Parameters_expect>1e-08</Parameters_expect> | |
15 <Parameters_gap-open>11</Parameters_gap-open> | |
16 <Parameters_gap-extend>1</Parameters_gap-extend> | |
17 <Parameters_filter>F</Parameters_filter> | |
18 </Parameters> | |
19 </BlastOutput_param> | |
11 | 20 <BlastOutput_iterations> |
21 <Iteration> | |
22 <Iteration_iter-num>1</Iteration_iter-num> | |
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60d0c6c1a71f
planemo upload for repository https://github.com/peterjc/galaxy_blast/tree/master/tools/blastxml_to_top_descr commit 3f6b5c953d522a724bbcd403bcb86f1e2757a556-dirty
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23 <Iteration_query-ID>Q9BS26</Iteration_query-ID> |
11 | 24 <Iteration_query-def>Endoplasmic reticulum resident protein 44 OS=Homo sapiens GN=ERP44 PE=1 SV=1</Iteration_query-def> |
25 <Iteration_query-len>406</Iteration_query-len> | |
26 <Iteration_hits> | |
27 </Iteration_hits> | |
28 <Iteration_stat> | |
29 <Statistics> | |
30 <Statistics_db-num>0</Statistics_db-num> | |
31 <Statistics_db-len>0</Statistics_db-len> | |
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planemo upload for repository https://github.com/peterjc/galaxy_blast/tree/master/tools/blastxml_to_top_descr commit 3f6b5c953d522a724bbcd403bcb86f1e2757a556-dirty
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32 <Statistics_hsp-len>42</Statistics_hsp-len> |
60d0c6c1a71f
planemo upload for repository https://github.com/peterjc/galaxy_blast/tree/master/tools/blastxml_to_top_descr commit 3f6b5c953d522a724bbcd403bcb86f1e2757a556-dirty
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33 <Statistics_eff-space>657748</Statistics_eff-space> |
11 | 34 <Statistics_kappa>0.041</Statistics_kappa> |
35 <Statistics_lambda>0.267</Statistics_lambda> | |
36 <Statistics_entropy>0.14</Statistics_entropy> | |
37 </Statistics> | |
38 </Iteration_stat> | |
39 <Iteration_message>No hits found</Iteration_message> | |
40 </Iteration> | |
41 <Iteration> | |
42 <Iteration_iter-num>2</Iteration_iter-num> | |
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60d0c6c1a71f
planemo upload for repository https://github.com/peterjc/galaxy_blast/tree/master/tools/blastxml_to_top_descr commit 3f6b5c953d522a724bbcd403bcb86f1e2757a556-dirty
peterjc
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43 <Iteration_query-ID>Q9NSY1</Iteration_query-ID> |
60d0c6c1a71f
planemo upload for repository https://github.com/peterjc/galaxy_blast/tree/master/tools/blastxml_to_top_descr commit 3f6b5c953d522a724bbcd403bcb86f1e2757a556-dirty
peterjc
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44 <Iteration_query-def>BMP-2-inducible protein kinase OS=Homo sapiens GN=BMP2K PE=1 SV=2</Iteration_query-def> |
60d0c6c1a71f
planemo upload for repository https://github.com/peterjc/galaxy_blast/tree/master/tools/blastxml_to_top_descr commit 3f6b5c953d522a724bbcd403bcb86f1e2757a556-dirty
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45 <Iteration_query-len>1161</Iteration_query-len> |
11 | 46 <Iteration_hits> |
47 </Iteration_hits> | |
48 <Iteration_stat> | |
49 <Statistics> | |
50 <Statistics_db-num>0</Statistics_db-num> | |
51 <Statistics_db-len>0</Statistics_db-len> | |
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60d0c6c1a71f
planemo upload for repository https://github.com/peterjc/galaxy_blast/tree/master/tools/blastxml_to_top_descr commit 3f6b5c953d522a724bbcd403bcb86f1e2757a556-dirty
peterjc
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52 <Statistics_hsp-len>50</Statistics_hsp-len> |
60d0c6c1a71f
planemo upload for repository https://github.com/peterjc/galaxy_blast/tree/master/tools/blastxml_to_top_descr commit 3f6b5c953d522a724bbcd403bcb86f1e2757a556-dirty
peterjc
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14
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53 <Statistics_eff-space>1954249</Statistics_eff-space> |
11 | 54 <Statistics_kappa>0.041</Statistics_kappa> |
55 <Statistics_lambda>0.267</Statistics_lambda> | |
56 <Statistics_entropy>0.14</Statistics_entropy> | |
57 </Statistics> | |
58 </Iteration_stat> | |
59 <Iteration_message>No hits found</Iteration_message> | |
60 </Iteration> | |
61 <Iteration> | |
62 <Iteration_iter-num>3</Iteration_iter-num> | |
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60d0c6c1a71f
planemo upload for repository https://github.com/peterjc/galaxy_blast/tree/master/tools/blastxml_to_top_descr commit 3f6b5c953d522a724bbcd403bcb86f1e2757a556-dirty
peterjc
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63 <Iteration_query-ID>P06213</Iteration_query-ID> |
60d0c6c1a71f
planemo upload for repository https://github.com/peterjc/galaxy_blast/tree/master/tools/blastxml_to_top_descr commit 3f6b5c953d522a724bbcd403bcb86f1e2757a556-dirty
peterjc
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64 <Iteration_query-def>Insulin receptor OS=Homo sapiens GN=INSR PE=1 SV=4</Iteration_query-def> |
60d0c6c1a71f
planemo upload for repository https://github.com/peterjc/galaxy_blast/tree/master/tools/blastxml_to_top_descr commit 3f6b5c953d522a724bbcd403bcb86f1e2757a556-dirty
peterjc
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65 <Iteration_query-len>1382</Iteration_query-len> |
11 | 66 <Iteration_hits> |
67 </Iteration_hits> | |
68 <Iteration_stat> | |
69 <Statistics> | |
70 <Statistics_db-num>0</Statistics_db-num> | |
71 <Statistics_db-len>0</Statistics_db-len> | |
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60d0c6c1a71f
planemo upload for repository https://github.com/peterjc/galaxy_blast/tree/master/tools/blastxml_to_top_descr commit 3f6b5c953d522a724bbcd403bcb86f1e2757a556-dirty
peterjc
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72 <Statistics_hsp-len>51</Statistics_hsp-len> |
60d0c6c1a71f
planemo upload for repository https://github.com/peterjc/galaxy_blast/tree/master/tools/blastxml_to_top_descr commit 3f6b5c953d522a724bbcd403bcb86f1e2757a556-dirty
peterjc
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73 <Statistics_eff-space>2333243</Statistics_eff-space> |
11 | 74 <Statistics_kappa>0.041</Statistics_kappa> |
75 <Statistics_lambda>0.267</Statistics_lambda> | |
76 <Statistics_entropy>0.14</Statistics_entropy> | |
77 </Statistics> | |
78 </Iteration_stat> | |
79 <Iteration_message>No hits found</Iteration_message> | |
80 </Iteration> | |
81 <Iteration> | |
82 <Iteration_iter-num>4</Iteration_iter-num> | |
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60d0c6c1a71f
planemo upload for repository https://github.com/peterjc/galaxy_blast/tree/master/tools/blastxml_to_top_descr commit 3f6b5c953d522a724bbcd403bcb86f1e2757a556-dirty
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83 <Iteration_query-ID>P08100</Iteration_query-ID> |
11 | 84 <Iteration_query-def>Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1</Iteration_query-def> |
85 <Iteration_query-len>348</Iteration_query-len> | |
86 <Iteration_hits> | |
87 <Hit> | |
88 <Hit_num>1</Hit_num> | |
89 <Hit_id>gi|57163783|ref|NP_001009242.1|</Hit_id> | |
90 <Hit_def>rhodopsin [Felis catus]</Hit_def> | |
91 <Hit_accession>NP_001009242</Hit_accession> | |
92 <Hit_len>348</Hit_len> | |
93 <Hit_hsps> | |
94 <Hsp> | |
95 <Hsp_num>1</Hsp_num> | |
96 <Hsp_bit-score>701.049</Hsp_bit-score> | |
97 <Hsp_score>1808</Hsp_score> | |
98 <Hsp_evalue>0</Hsp_evalue> | |
99 <Hsp_query-from>1</Hsp_query-from> | |
100 <Hsp_query-to>348</Hsp_query-to> | |
101 <Hsp_hit-from>1</Hsp_hit-from> | |
102 <Hsp_hit-to>348</Hsp_hit-to> | |
103 <Hsp_query-frame>0</Hsp_query-frame> | |
104 <Hsp_hit-frame>0</Hsp_hit-frame> | |
105 <Hsp_identity>336</Hsp_identity> | |
106 <Hsp_positive>343</Hsp_positive> | |
107 <Hsp_gaps>0</Hsp_gaps> | |
108 <Hsp_align-len>348</Hsp_align-len> | |
109 <Hsp_qseq>MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEASATVSKTETSQVAPA</Hsp_qseq> | |
110 <Hsp_hseq>MNGTEGPNFYVPFSNKTGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTLPAFFAKSSSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTTGSKTETSQVAPA</Hsp_hseq> | |
111 <Hsp_midline>MNGTEGPNFYVPFSN TGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMV GGFT+TLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPL GWSRYIPEG+QCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMI+IFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMT+PAFFAKS++IYNPVIYIMMNKQFRNCMLTT+CCGKNPLGDDEAS T SKTETSQVAPA</Hsp_midline> | |
112 </Hsp> | |
113 </Hit_hsps> | |
114 </Hit> | |
115 <Hit> | |
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planemo upload for repository https://github.com/peterjc/galaxy_blast/tree/master/tools/blastxml_to_top_descr commit 3f6b5c953d522a724bbcd403bcb86f1e2757a556-dirty
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116 <Hit_num>2</Hit_num> |
60d0c6c1a71f
planemo upload for repository https://github.com/peterjc/galaxy_blast/tree/master/tools/blastxml_to_top_descr commit 3f6b5c953d522a724bbcd403bcb86f1e2757a556-dirty
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117 <Hit_id>gi|223523|prf||0811197A</Hit_id> |
60d0c6c1a71f
planemo upload for repository https://github.com/peterjc/galaxy_blast/tree/master/tools/blastxml_to_top_descr commit 3f6b5c953d522a724bbcd403bcb86f1e2757a556-dirty
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118 <Hit_def>rhodopsin [Bos taurus]</Hit_def> |
60d0c6c1a71f
planemo upload for repository https://github.com/peterjc/galaxy_blast/tree/master/tools/blastxml_to_top_descr commit 3f6b5c953d522a724bbcd403bcb86f1e2757a556-dirty
peterjc
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119 <Hit_accession>0811197A</Hit_accession> |
60d0c6c1a71f
planemo upload for repository https://github.com/peterjc/galaxy_blast/tree/master/tools/blastxml_to_top_descr commit 3f6b5c953d522a724bbcd403bcb86f1e2757a556-dirty
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120 <Hit_len>347</Hit_len> |
11 | 121 <Hit_hsps> |
122 <Hsp> | |
123 <Hsp_num>1</Hsp_num> | |
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60d0c6c1a71f
planemo upload for repository https://github.com/peterjc/galaxy_blast/tree/master/tools/blastxml_to_top_descr commit 3f6b5c953d522a724bbcd403bcb86f1e2757a556-dirty
peterjc
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124 <Hsp_bit-score>673.315</Hsp_bit-score> |
60d0c6c1a71f
planemo upload for repository https://github.com/peterjc/galaxy_blast/tree/master/tools/blastxml_to_top_descr commit 3f6b5c953d522a724bbcd403bcb86f1e2757a556-dirty
peterjc
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125 <Hsp_score>1736</Hsp_score> |
11 | 126 <Hsp_evalue>0</Hsp_evalue> |
127 <Hsp_query-from>1</Hsp_query-from> | |
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60d0c6c1a71f
planemo upload for repository https://github.com/peterjc/galaxy_blast/tree/master/tools/blastxml_to_top_descr commit 3f6b5c953d522a724bbcd403bcb86f1e2757a556-dirty
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128 <Hsp_query-to>348</Hsp_query-to> |
11 | 129 <Hsp_hit-from>1</Hsp_hit-from> |
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60d0c6c1a71f
planemo upload for repository https://github.com/peterjc/galaxy_blast/tree/master/tools/blastxml_to_top_descr commit 3f6b5c953d522a724bbcd403bcb86f1e2757a556-dirty
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130 <Hsp_hit-to>347</Hsp_hit-to> |
11 | 131 <Hsp_query-frame>0</Hsp_query-frame> |
132 <Hsp_hit-frame>0</Hsp_hit-frame> | |
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60d0c6c1a71f
planemo upload for repository https://github.com/peterjc/galaxy_blast/tree/master/tools/blastxml_to_top_descr commit 3f6b5c953d522a724bbcd403bcb86f1e2757a556-dirty
peterjc
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133 <Hsp_identity>324</Hsp_identity> |
60d0c6c1a71f
planemo upload for repository https://github.com/peterjc/galaxy_blast/tree/master/tools/blastxml_to_top_descr commit 3f6b5c953d522a724bbcd403bcb86f1e2757a556-dirty
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134 <Hsp_positive>336</Hsp_positive> |
11 | 135 <Hsp_gaps>1</Hsp_gaps> |
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60d0c6c1a71f
planemo upload for repository https://github.com/peterjc/galaxy_blast/tree/master/tools/blastxml_to_top_descr commit 3f6b5c953d522a724bbcd403bcb86f1e2757a556-dirty
peterjc
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136 <Hsp_align-len>348</Hsp_align-len> |
60d0c6c1a71f
planemo upload for repository https://github.com/peterjc/galaxy_blast/tree/master/tools/blastxml_to_top_descr commit 3f6b5c953d522a724bbcd403bcb86f1e2757a556-dirty
peterjc
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137 <Hsp_qseq>MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEASATVSKTETSQVAPA</Hsp_qseq> |
60d0c6c1a71f
planemo upload for repository https://github.com/peterjc/galaxy_blast/tree/master/tools/blastxml_to_top_descr commit 3f6b5c953d522a724bbcd403bcb86f1e2757a556-dirty
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138 <Hsp_hseq>MNGTEGPNFYVPFSNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGID-YTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNPLGDDEASTTVSKTETSQVAPA</Hsp_hseq> |
60d0c6c1a71f
planemo upload for repository https://github.com/peterjc/galaxy_blast/tree/master/tools/blastxml_to_top_descr commit 3f6b5c953d522a724bbcd403bcb86f1e2757a556-dirty
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139 <Hsp_midline>MNGTEGPNFYVPFSN TGVVRSPFE PQYYLAEPWQFSMLAAYMFLLI+LGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMV GGFT+TLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPL GWSRYIPEG+QCSCGID YT E NNESFVIYMFVVHF IP+I+IFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICW+PYA VAFYIFTHQGS+FGPIFMTIPAFFAK++A+YNPVIYIMMNKQFRNCM+TT+CCGKNPLGDDEAS TVSKTETSQVAPA</Hsp_midline> |
11 | 140 </Hsp> |
141 </Hit_hsps> | |
142 </Hit> | |
143 <Hit> | |
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planemo upload for repository https://github.com/peterjc/galaxy_blast/tree/master/tools/blastxml_to_top_descr commit 3f6b5c953d522a724bbcd403bcb86f1e2757a556-dirty
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144 <Hit_num>3</Hit_num> |
11 | 145 <Hit_id>gi|283855846|gb|ADB45242.1|</Hit_id> |
146 <Hit_def>rhodopsin [Cynopterus brachyotis]</Hit_def> | |
147 <Hit_accession>ADB45242</Hit_accession> | |
148 <Hit_len>328</Hit_len> | |
149 <Hit_hsps> | |
150 <Hsp> | |
151 <Hsp_num>1</Hsp_num> | |
152 <Hsp_bit-score>653.284</Hsp_bit-score> | |
153 <Hsp_score>1684</Hsp_score> | |
154 <Hsp_evalue>0</Hsp_evalue> | |
155 <Hsp_query-from>11</Hsp_query-from> | |
156 <Hsp_query-to>338</Hsp_query-to> | |
157 <Hsp_hit-from>1</Hsp_hit-from> | |
158 <Hsp_hit-to>328</Hsp_hit-to> | |
159 <Hsp_query-frame>0</Hsp_query-frame> | |
160 <Hsp_hit-frame>0</Hsp_hit-frame> | |
161 <Hsp_identity>311</Hsp_identity> | |
162 <Hsp_positive>321</Hsp_positive> | |
163 <Hsp_gaps>0</Hsp_gaps> | |
164 <Hsp_align-len>328</Hsp_align-len> | |
165 <Hsp_qseq>VPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEASATVS</Hsp_qseq> | |
166 <Hsp_hseq>VPFSNKTGVVRSPFEHPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGLALTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSNFGPIFMTLPAFFAKSSSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTTAS</Hsp_hseq> | |
167 <Hsp_midline>VPFSN TGVVRSPFE+PQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMV GGFT+TLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMG+A TWVMALACAAPPL GWSRYIPEG+QCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMI+IFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICW+PYA VAFYIFTHQGSNFGPIFMT+PAFFAKS++IYNPVIYIMMNKQFRNCMLTT+CCGKNPLGDDEAS T S</Hsp_midline> | |
168 </Hsp> | |
169 </Hit_hsps> | |
170 </Hit> | |
171 <Hit> | |
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172 <Hit_num>4</Hit_num> |
11 | 173 <Hit_id>gi|283855823|gb|ADB45229.1|</Hit_id> |
174 <Hit_def>rhodopsin [Myotis pilosus]</Hit_def> | |
175 <Hit_accession>ADB45229</Hit_accession> | |
176 <Hit_len>328</Hit_len> | |
177 <Hit_hsps> | |
178 <Hsp> | |
179 <Hsp_num>1</Hsp_num> | |
180 <Hsp_bit-score>631.328</Hsp_bit-score> | |
181 <Hsp_score>1627</Hsp_score> | |
182 <Hsp_evalue>0</Hsp_evalue> | |
183 <Hsp_query-from>11</Hsp_query-from> | |
184 <Hsp_query-to>338</Hsp_query-to> | |
185 <Hsp_hit-from>1</Hsp_hit-from> | |
186 <Hsp_hit-to>328</Hsp_hit-to> | |
187 <Hsp_query-frame>0</Hsp_query-frame> | |
188 <Hsp_hit-frame>0</Hsp_hit-frame> | |
189 <Hsp_identity>311</Hsp_identity> | |
190 <Hsp_positive>323</Hsp_positive> | |
191 <Hsp_gaps>0</Hsp_gaps> | |
192 <Hsp_align-len>328</Hsp_align-len> | |
193 <Hsp_qseq>VPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEASATVS</Hsp_qseq> | |
194 <Hsp_hseq>VPFSNKTGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVANLFMVFGGFTTTLYTSMHGYFVFGATGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGLAFTWVMALACAAPPLAGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVVAFLICWLPYASVAFYIFTHQGSNFGPVFMTIPAFFAKSSSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTTAS</Hsp_hseq> | |
195 <Hsp_midline>VPFSN TGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVA+LFMV GGFT+TLYTS+HGYFVFG TGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMG+AFTWVMALACAAPPLAGWSRYIPEG+QCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMI+IFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMV+AFLICW+PYASVAFYIFTHQGSNFGP+FMTIPAFFAKS++IYNPVIYIMMNKQFRNCMLTT+CCGKNPLGDDEAS T S</Hsp_midline> | |
196 </Hsp> | |
197 </Hit_hsps> | |
198 </Hit> | |
199 <Hit> | |
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200 <Hit_num>5</Hit_num> |
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planemo upload for repository https://github.com/peterjc/galaxy_blast/tree/master/tools/blastxml_to_top_descr commit 3f6b5c953d522a724bbcd403bcb86f1e2757a556-dirty
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201 <Hit_id>gi|3024260|sp|P56514.1|OPSD_BUFBU</Hit_id> |
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202 <Hit_def>RecName: Full=Rhodopsin</Hit_def> |
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planemo upload for repository https://github.com/peterjc/galaxy_blast/tree/master/tools/blastxml_to_top_descr commit 3f6b5c953d522a724bbcd403bcb86f1e2757a556-dirty
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203 <Hit_accession>P56514</Hit_accession> |
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planemo upload for repository https://github.com/peterjc/galaxy_blast/tree/master/tools/blastxml_to_top_descr commit 3f6b5c953d522a724bbcd403bcb86f1e2757a556-dirty
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204 <Hit_len>354</Hit_len> |
11 | 205 <Hit_hsps> |
206 <Hsp> | |
207 <Hsp_num>1</Hsp_num> | |
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208 <Hsp_bit-score>619.002</Hsp_bit-score> |
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planemo upload for repository https://github.com/peterjc/galaxy_blast/tree/master/tools/blastxml_to_top_descr commit 3f6b5c953d522a724bbcd403bcb86f1e2757a556-dirty
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209 <Hsp_score>1595</Hsp_score> |
11 | 210 <Hsp_evalue>0</Hsp_evalue> |
211 <Hsp_query-from>1</Hsp_query-from> | |
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212 <Hsp_query-to>341</Hsp_query-to> |
11 | 213 <Hsp_hit-from>1</Hsp_hit-from> |
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214 <Hsp_hit-to>342</Hsp_hit-to> |
11 | 215 <Hsp_query-frame>0</Hsp_query-frame> |
216 <Hsp_hit-frame>0</Hsp_hit-frame> | |
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217 <Hsp_identity>290</Hsp_identity> |
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218 <Hsp_positive>322</Hsp_positive> |
11 | 219 <Hsp_gaps>1</Hsp_gaps> |
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220 <Hsp_align-len>342</Hsp_align-len> |
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221 <Hsp_qseq>MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEA-SATVSKTE</Hsp_qseq> |
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222 <Hsp_hseq>MNGTEGPNFYIPMSNKTGVVRSPFEYPQYYLAEPWQYSILCAYMFLLILLGFPINFMTLYVTIQHKKLRTPLNYILLNLAFANHFMVLCGFTVTMYSSMNGYFILGATGCYVEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFSENHAVMGVAFTWIMALSCAVPPLLGWSRYIPEGMQCSCGVDYYTLKPEVNNESFVIYMFVVHFTIPLIIIFFCYGRLVCTVKEAAAQQQESATTQKAEKEVTRMVIIMVVFFLICWVPYASVAFFIFSNQGSEFGPIFMTVPAFFAKSSSIYNPVIYIMLNKQFRNCMITTLCCGKNPFGEDDASSAATSKTE</Hsp_hseq> |
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223 <Hsp_midline>MNGTEGPNFY+P SN TGVVRSPFEYPQYYLAEPWQ+S+L AYMFLLI+LGFPINF+TLYVT+QHKKLRTPLNYILLNLA A+ FMVL GFT T+Y+S++GYF+ G TGC +EGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRF ENHA+MGVAFTW+MAL+CA PPL GWSRYIPEG+QCSCG+DYYTLKPEVNNESFVIYMFVVHFTIP+IIIFFCYG+LV TVKEAAAQQQESATTQKAEKEVTRMVIIMV+ FLICWVPYASVAF+IF++QGS FGPIFMT+PAFFAKS++IYNPVIYIM+NKQFRNCM+TT+CCGKNP G+D+A SA SKTE</Hsp_midline> |
11 | 224 </Hsp> |
225 </Hit_hsps> | |
226 </Hit> | |
227 <Hit> | |
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228 <Hit_num>6</Hit_num> |
11 | 229 <Hit_id>gi|12583665|dbj|BAB21486.1|</Hit_id> |
230 <Hit_def>fresh water form rod opsin [Conger myriaster]</Hit_def> | |
231 <Hit_accession>BAB21486</Hit_accession> | |
232 <Hit_len>354</Hit_len> | |
233 <Hit_hsps> | |
234 <Hsp> | |
235 <Hsp_num>1</Hsp_num> | |
236 <Hsp_bit-score>599.356</Hsp_bit-score> | |
237 <Hsp_score>1544</Hsp_score> | |
238 <Hsp_evalue>0</Hsp_evalue> | |
239 <Hsp_query-from>1</Hsp_query-from> | |
240 <Hsp_query-to>341</Hsp_query-to> | |
241 <Hsp_hit-from>1</Hsp_hit-from> | |
242 <Hsp_hit-to>342</Hsp_hit-to> | |
243 <Hsp_query-frame>0</Hsp_query-frame> | |
244 <Hsp_hit-frame>0</Hsp_hit-frame> | |
245 <Hsp_identity>281</Hsp_identity> | |
246 <Hsp_positive>314</Hsp_positive> | |
247 <Hsp_gaps>1</Hsp_gaps> | |
248 <Hsp_align-len>342</Hsp_align-len> | |
249 <Hsp_qseq>MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPL-GDDEASATVSKTE</Hsp_qseq> | |
250 <Hsp_hseq>MNGTEGPNFYIPMSNATGVVRSPFEYPQYYLAEPWAFSALSAYMFFLIIAGFPINFLTLYVTIEHKKLRTPLNYILLNLAVADLFMVFGGFTTTMYTSMHGYFVFGPTGCNIEGFFATLGGEIALWCLVVLAIERWMVVCKPVTNFRFGESHAIMGVMVTWTMALACALPPLFGWSRYIPEGLQCSCGIDYYTRAPGINNESFVIYMFTCHFSIPLAVISFCYGRLVCTVKEAAAQQQESETTQRAEREVTRMVVIMVISFLVCWVPYASVAWYIFTHQGSTFGPIFMTIPSFFAKSSALYNPMIYICMNKQFRHCMITTLCCGKNPFEEEDGASATSSKTE</Hsp_hseq> | |
251 <Hsp_midline>MNGTEGPNFY+P SNATGVVRSPFEYPQYYLAEPW FS L+AYMF LI+ GFPINFLTLYVT++HKKLRTPLNYILLNLAVADLFMV GGFT+T+YTS+HGYFVFGPTGCN+EGFFATLGGEIALW LVVLAIER++VVCKP++NFRFGE+HAIMGV TW MALACA PPL GWSRYIPEGLQCSCGIDYYT P +NNESFVIYMF HF+IP+ +I FCYG+LV TVKEAAAQQQES TTQ+AE+EVTRMV+IMVI+FL+CWVPYASVA+YIFTHQGS FGPIFMTIP+FFAKS+A+YNP+IYI MNKQFR+CM+TT+CCGKNP +D ASAT SKTE</Hsp_midline> | |
252 </Hsp> | |
253 </Hit_hsps> | |
254 </Hit> | |
255 </Iteration_hits> | |
256 <Iteration_stat> | |
257 <Statistics> | |
258 <Statistics_db-num>0</Statistics_db-num> | |
259 <Statistics_db-len>0</Statistics_db-len> | |
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260 <Statistics_hsp-len>41</Statistics_hsp-len> |
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261 <Statistics_eff-space>556591</Statistics_eff-space> |
11 | 262 <Statistics_kappa>0.041</Statistics_kappa> |
263 <Statistics_lambda>0.267</Statistics_lambda> | |
264 <Statistics_entropy>0.14</Statistics_entropy> | |
265 </Statistics> | |
266 </Iteration_stat> | |
267 </Iteration> | |
268 </BlastOutput_iterations> | |
269 </BlastOutput> | |
270 |