Mercurial > repos > peterjc > blast_rbh
changeset 37:69589275a0b2 draft
planemo upload for repository https://github.com/peterjc/galaxy_blast/tree/master/tools/blast_rbh commit fcaa51faf93ef07835c3bade298a8d24d931ee1b-dirty
author | peterjc |
---|---|
date | Fri, 09 Nov 2018 11:58:06 -0500 |
parents | 517bf3bad66b |
children | 632d8517dad1 |
files | tools/blast_rbh/blast_rbh.py |
diffstat | 1 files changed, 2 insertions(+), 2 deletions(-) [+] |
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--- a/tools/blast_rbh/blast_rbh.py Tue Oct 23 06:25:21 2018 -0400 +++ b/tools/blast_rbh/blast_rbh.py Fri Nov 09 11:58:06 2018 -0500 @@ -55,7 +55,7 @@ $ python blast_rbh.py -a prot -t blasp -o output.tsv protA.fasta protB.fasta -There is additional guideance in the help text in the blast_rbh.xml file, +There is additional guidance in the help text in the blast_rbh.xml file, which is shown to the user via the Galaxy interface to this tool. """ @@ -274,7 +274,7 @@ by_seq = dict() try: from Bio import SeqIO - except KeyError: + except ImportError: sys.exit("Missing Biopython") for record in SeqIO.parse(input_fasta, "fasta"): s = str(record.seq).upper()