# HG changeset patch # User peterjc # Date 1541782686 18000 # Node ID 69589275a0b295beb1f2340e2c9370bf7bd31867 # Parent 517bf3bad66b643b1271ed7e6455af5761a6deaf planemo upload for repository https://github.com/peterjc/galaxy_blast/tree/master/tools/blast_rbh commit fcaa51faf93ef07835c3bade298a8d24d931ee1b-dirty diff -r 517bf3bad66b -r 69589275a0b2 tools/blast_rbh/blast_rbh.py --- a/tools/blast_rbh/blast_rbh.py Tue Oct 23 06:25:21 2018 -0400 +++ b/tools/blast_rbh/blast_rbh.py Fri Nov 09 11:58:06 2018 -0500 @@ -55,7 +55,7 @@ $ python blast_rbh.py -a prot -t blasp -o output.tsv protA.fasta protB.fasta -There is additional guideance in the help text in the blast_rbh.xml file, +There is additional guidance in the help text in the blast_rbh.xml file, which is shown to the user via the Galaxy interface to this tool. """ @@ -274,7 +274,7 @@ by_seq = dict() try: from Bio import SeqIO - except KeyError: + except ImportError: sys.exit("Missing Biopython") for record in SeqIO.parse(input_fasta, "fasta"): s = str(record.seq).upper()