Mercurial > repos > peter-waltman > ucsc_cluster_tools2
diff cluster.tools/extract.TCGA.survival.data.R @ 3:563832f48c08 draft
Uploaded
| author | peter-waltman |
|---|---|
| date | Fri, 01 Mar 2013 19:51:25 -0500 |
| parents | dddfeedb85af |
| children |
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--- a/cluster.tools/extract.TCGA.survival.data.R Fri Mar 01 10:17:24 2013 -0500 +++ b/cluster.tools/extract.TCGA.survival.data.R Fri Mar 01 19:51:25 2013 -0500 @@ -93,6 +93,7 @@ } clinical.data <- as.numeric( ! grepl( "(LIVING|Not)", clinical.data ) ) } + if ( is.null(opt$time.column ) ) { time.colname <- "CDE.clinical_time"
