Mercurial > repos > peter-waltman > ucsc_cluster_tools2

annotate cluster.tools/cluster.tab.2.rdata.py @ 8:a58527c632b7 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Uploaded
author peter-waltman
date Mon, 11 Mar 2013 16:31:29 -0400
parents
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
8
a58527c632b7 Uploaded
peter-waltman
parents:
diff changeset
1 #!/usr/bin/env python
a58527c632b7 Uploaded
peter-waltman
parents:
diff changeset
2 import os
a58527c632b7 Uploaded
peter-waltman
parents:
diff changeset
3 import sys
a58527c632b7 Uploaded
peter-waltman
parents:
diff changeset
4 import subprocess
a58527c632b7 Uploaded
peter-waltman
parents:
diff changeset
5
a58527c632b7 Uploaded
peter-waltman
parents:
diff changeset
6 select_script_path = os.path.join(os.path.dirname(os.path.realpath(__file__)), "cluster.tab.2.rdata.R")
a58527c632b7 Uploaded
peter-waltman
parents:
diff changeset
7
a58527c632b7 Uploaded
peter-waltman
parents:
diff changeset
8 cmd_args = [ "Rscript", select_script_path ] + sys.argv[1:]
a58527c632b7 Uploaded
peter-waltman
parents:
diff changeset
9
a58527c632b7 Uploaded
peter-waltman
parents:
diff changeset
10 proc = subprocess.Popen( cmd_args, stderr=subprocess.PIPE, stdout=subprocess.PIPE )
a58527c632b7 Uploaded
peter-waltman
parents:
diff changeset
11 (stdoutdata, stderrdata) = proc.communicate()
a58527c632b7 Uploaded
peter-waltman
parents:
diff changeset
12 if proc.returncode:
a58527c632b7 Uploaded
peter-waltman
parents:
diff changeset
13 sys.stderr.write(stderrdata)
a58527c632b7 Uploaded
peter-waltman
parents:
diff changeset
14 sys.stdout.write(stdoutdata)