Mercurial > repos > peter-waltman > ucsc_cluster_tools
view cluster.tools/remove.tcga.normals.xml @ 2:b442996b66ae draft
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author | peter-waltman |
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date | Wed, 27 Feb 2013 20:17:04 -0500 |
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<tool id="remove_tcga_normal_samples" name="Remove TGCA Normal Samples" force_history_refresh="True"> <command interpreter="python">remove.tcga.normals.py -d $dataset -o ${output} </command> <inputs> <param name="dataset" type="data" format='tabular' label="Matrix containing TCGA Normal Samples"/> </inputs> <outputs> <data format="tabular" name="output" label="Tumor Sample Matrix"/> </outputs> <help> .. class:: infomark **Remove Normal Samples** - Tool to remove the normal samples from a matrix **(ASSUMES samples are in the columns of matrix)** **OUTPUT:** A new matrix without normal samples ---- **INPUT** - **Matrix that contains normal samples** Input matrix that potentially contains normal samples </help> </tool>