Mercurial > repos > pavanvidem > blockclust

changeset 1:05c89fe76736 draft default tip

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Uploaded
author pavanvidem
date Tue, 20 Aug 2013 04:34:09 -0400
parents daa913e85b5a
children
files tool_dependencies.xml
diffstat 1 files changed, 23 insertions(+), 6 deletions(-) [+]
line wrap: on
line diff
--- a/tool_dependencies.xml	Mon Aug 19 11:47:18 2013 -0400
+++ b/tool_dependencies.xml	Tue Aug 20 04:34:09 2013 -0400
@@ -39,16 +39,13 @@
         </readme>
     </package>
 
-
-
-<!--
-    <package name="BEDTools" version="1.0">
+   <package name="BlockClust" version="1.0">
         <install version="1.0">
             <actions>
-                <action type="download_by_url">http://bedtools.googlecode.com/files/BEDTools.v2.17.0.tar.gz</action>
+                <action type="download_by_url">wget http://132.230.153.87/BlockClust.tar.gz</action>
                 <action type="shell_command">make</action>
                 <action type="move_file">
-                    <source>bin/bamToBed</source>
+                    <source>BlockClust</source>
                     <destination>$INSTALL_DIR/bin</destination>
                 </action>
                 <action type="set_environment">
@@ -60,5 +57,25 @@
 	
         </readme>
     </package>
+
+<!--
+    <package name="BEDTools" version="1.0">
+        <install version="1.0">
+            <actions>
+                <action type="download_by_url">http://bedtools.googlecode.com/files/BEDTools.v2.17.0.tar.gz</action>
+                <action type="shell_command">make</action>
+		<action type="move_directory_files">
+		    <source_directory>bin</source_directory>
+		    <destination_directory>$INSTALL_DIR/bin</destination_directory>
+		</action>
+                <action type="set_environment">
+                    <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
+                </action>
+            </actions>
+        </install>
+        <readme>
+	
+        </readme>
+    </package>
 -->
 </tool_dependency>