Mercurial > repos > pavanvidem > blockclust
comparison tool_dependencies.xml @ 1:05c89fe76736 draft default tip
Uploaded
| author | pavanvidem |
|---|---|
| date | Tue, 20 Aug 2013 04:34:09 -0400 |
| parents | daa913e85b5a |
| children |
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| 0:daa913e85b5a | 1:05c89fe76736 |
|---|---|
| 37 <readme> | 37 <readme> |
| 38 | 38 |
| 39 </readme> | 39 </readme> |
| 40 </package> | 40 </package> |
| 41 | 41 |
| 42 | 42 <package name="BlockClust" version="1.0"> |
| 43 | |
| 44 <!-- | |
| 45 <package name="BEDTools" version="1.0"> | |
| 46 <install version="1.0"> | 43 <install version="1.0"> |
| 47 <actions> | 44 <actions> |
| 48 <action type="download_by_url">http://bedtools.googlecode.com/files/BEDTools.v2.17.0.tar.gz</action> | 45 <action type="download_by_url">wget http://132.230.153.87/BlockClust.tar.gz</action> |
| 49 <action type="shell_command">make</action> | 46 <action type="shell_command">make</action> |
| 50 <action type="move_file"> | 47 <action type="move_file"> |
| 51 <source>bin/bamToBed</source> | 48 <source>BlockClust</source> |
| 52 <destination>$INSTALL_DIR/bin</destination> | 49 <destination>$INSTALL_DIR/bin</destination> |
| 53 </action> | 50 </action> |
| 54 <action type="set_environment"> | 51 <action type="set_environment"> |
| 55 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable> | 52 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable> |
| 56 </action> | 53 </action> |
| 58 </install> | 55 </install> |
| 59 <readme> | 56 <readme> |
| 60 | 57 |
| 61 </readme> | 58 </readme> |
| 62 </package> | 59 </package> |
| 60 | |
| 61 <!-- | |
| 62 <package name="BEDTools" version="1.0"> | |
| 63 <install version="1.0"> | |
| 64 <actions> | |
| 65 <action type="download_by_url">http://bedtools.googlecode.com/files/BEDTools.v2.17.0.tar.gz</action> | |
| 66 <action type="shell_command">make</action> | |
| 67 <action type="move_directory_files"> | |
| 68 <source_directory>bin</source_directory> | |
| 69 <destination_directory>$INSTALL_DIR/bin</destination_directory> | |
| 70 </action> | |
| 71 <action type="set_environment"> | |
| 72 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable> | |
| 73 </action> | |
| 74 </actions> | |
| 75 </install> | |
| 76 <readme> | |
| 77 | |
| 78 </readme> | |
| 79 </package> | |
| 63 --> | 80 --> |
| 64 </tool_dependency> | 81 </tool_dependency> |