Mercurial > repos > p.lucas > taxid_genusexpand_taxid2acc_offline_searchinhostcompletegenomedb
changeset 3:c6fc401b61b2 draft default tip
Change version of natsort for conda
| author | p.lucas |
|---|---|
| date | Thu, 28 Sep 2023 13:01:06 +0000 |
| parents | ad27c2b4e2c3 |
| children | |
| files | TAXID_genusexpand_taxid2acc_offline_searchinhostcompletegenomedb.xml |
| diffstat | 1 files changed, 2 insertions(+), 2 deletions(-) [+] |
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--- a/TAXID_genusexpand_taxid2acc_offline_searchinhostcompletegenomedb.xml Thu Sep 28 07:42:15 2023 +0000 +++ b/TAXID_genusexpand_taxid2acc_offline_searchinhostcompletegenomedb.xml Thu Sep 28 13:01:06 2023 +0000 @@ -1,4 +1,4 @@ -<tool id="TAXID_genusexpand_taxid2acc_offline_searchinhostcompletegenomedb" name="Used after Get acc number for complete genome after MEGABLAST_TAB_select_acc_under_taxids" version="1.1"> +<tool id="TAXID_genusexpand_taxid2acc_offline_searchinhostcompletegenomedb" name="Used after Get acc number for complete genome after MEGABLAST_TAB_select_acc_under_taxids" version="1.2"> <description> From a file of taxid and accession numbers (tsv), deduce species taxids, get ref genome acc nr list (all chr). (it will allow to have complete genomes when aligning with host to remove host reads) @@ -9,7 +9,7 @@ <requirements> <requirement type="package" version="3.9.16">python</requirement> <requirement type="package" version="3.1.2">ete3</requirement> - <requirement type="package" version="8.4.0">natsort</requirement> + <requirement type="package" version="8.2.0">natsort</requirement> </requirements> <command detect_errors="exit_code"><![CDATA[ python '$__tool_directory__/TAXID_genusexpand_taxid2acc_offline_searchinhostcompletegenomedb.py' -i ${input} -d ${taxid_host_db} -o ${output}