Mercurial > repos > p.lucas > taxid_genusexpand_taxid2acc
changeset 15:932ba9e04f3a draft
fix error line 160
author | p.lucas |
---|---|
date | Thu, 28 Sep 2023 13:55:56 +0000 |
parents | cc6f431bf992 |
children | 992af66092f7 |
files | TAXID_genusexpand_taxid2acc.py |
diffstat | 1 files changed, 1 insertions(+), 1 deletions(-) [+] |
line wrap: on
line diff
--- a/TAXID_genusexpand_taxid2acc.py Thu Sep 28 13:45:14 2023 +0000 +++ b/TAXID_genusexpand_taxid2acc.py Thu Sep 28 13:55:56 2023 +0000 @@ -157,7 +157,7 @@ # ncbi_tax_f = "/nfs/data/db/ete3/taxa.sqlite" ncbi_tax_f = os.path.expanduser("~/.etetoolkit/taxa.sqlite") if args.taxid_acc_in_f is not None: - taxid_acc_in_f = os.path.abspath(args.taxid_acc_f) + taxid_acc_in_f = os.path.abspath(args.taxid_acc_in_f) b_acc_in_f = True elif(not b_test): sys.exit("[Error] You must provide taxid_acc_in_f")