Mercurial > repos > oinizan > data_manager_frogs
changeset 2:2d2f8d990bff draft
"planemo upload for repository https://github.com/geraldinepascal/FROGS-wrappers/ commit 052af90b7eee0ccaff79e64e4706a8fbdb235783"
| author | oinizan |
|---|---|
| date | Thu, 19 Aug 2021 08:16:02 +0000 |
| parents | 04845601de8c |
| children | bf231c73b445 |
| files | data_manager/FROGS_data_manager.xml |
| diffstat | 1 files changed, 21 insertions(+), 10 deletions(-) [+] |
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--- a/data_manager/FROGS_data_manager.xml Wed Aug 18 15:33:28 2021 +0000 +++ b/data_manager/FROGS_data_manager.xml Thu Aug 19 08:16:02 2021 +0000 @@ -40,7 +40,9 @@ </outputs> <help> - @HELP_LOGO@ + .. image:: static/images/FROGS_logo.png + :height: 144 + :width: 110 FROGS datamanager allows to download preformated databases for FROGS Affiliation OTU tool. @@ -48,17 +50,26 @@ This tools is based on the `FROGS_databases.tsv.txt <http://genoweb.toulouse.inra.fr/frogs_databanks/assignation/FROGS_databases.tsv>`_, that we update each time a new database is formatted. - .. image:: static/images/FROGS_db.png - :height: 157 - :width: 961 + .. image:: static/images/FROGS_db.png + :height: 157 + :width: 961 - You may download all databases, but you may (should) filter whished database on different criteria: + You may download all databases, but you may (should) filter whished database on different criteria: + + - on a date, to download only last formated databases + - on an amplicon type + - on a base name + - eventually on a filtered name, this may be the case for example, for 16S SILVA database, for which we provide reference sequence with pintail score above a threshold - - on a date, to download only last formated databases - - on an amplicon type - - on a base name - - eventually on a filtered name, this may be the case for example, for 16S SILVA database, for which we provide reference sequence with pintail score above a threshold + Last option allow you to download only last version of previously selected databases, indeed we provide reference database since 2016 with for example, around 1 version of SILVA per year. + + **Contact** - Last option allow you to download only last version of previously selected databases, indeed we provide reference database since 2016 with for example, around 1 version of SILVA per year. + Contacts: frogs-support@inrae.fr + + Repositories: https://github.com/geraldinepascal/FROGS, https://github.com/geraldinepascal/FROGS-wrappers + + Website: http://frogs.toulouse.inrae.fr/ + </help> </tool> \ No newline at end of file