Mercurial > repos > oinizan > data_manager_frogs

annotate data_manager_conf.xml @ 4:34192d63196e draft default tip

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"planemo upload for repository https://github.com/geraldinepascal/FROGS-wrappers/ commit 052af90b7eee0ccaff79e64e4706a8fbdb235783-dirty"
author oinizan
date Thu, 19 Aug 2021 14:53:38 +0000
parents 493202ba3af5
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
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493202ba3af5 "planemo upload for repository https://github.com/geraldinepascal/FROGS-wrappers/ commit 56a8d94cd18a5b89f83ccfa9cdc7c80a28d044d4-dirty"
oinizan
parents:
diff changeset
1 <?xml version="1.0"?>
493202ba3af5 "planemo upload for repository https://github.com/geraldinepascal/FROGS-wrappers/ commit 56a8d94cd18a5b89f83ccfa9cdc7c80a28d044d4-dirty"
oinizan
parents:
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2 <data_managers>
493202ba3af5 "planemo upload for repository https://github.com/geraldinepascal/FROGS-wrappers/ commit 56a8d94cd18a5b89f83ccfa9cdc7c80a28d044d4-dirty"
oinizan
parents:
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3 <data_manager tool_file="data_manager/FROGS_data_manager.xml" id="frogs_data_manager">
493202ba3af5 "planemo upload for repository https://github.com/geraldinepascal/FROGS-wrappers/ commit 56a8d94cd18a5b89f83ccfa9cdc7c80a28d044d4-dirty"
oinizan
parents:
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4 <data_table name="frogs_db">
493202ba3af5 "planemo upload for repository https://github.com/geraldinepascal/FROGS-wrappers/ commit 56a8d94cd18a5b89f83ccfa9cdc7c80a28d044d4-dirty"
oinizan
parents:
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5 <output>
493202ba3af5 "planemo upload for repository https://github.com/geraldinepascal/FROGS-wrappers/ commit 56a8d94cd18a5b89f83ccfa9cdc7c80a28d044d4-dirty"
oinizan
parents:
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6 <column name="value" />
493202ba3af5 "planemo upload for repository https://github.com/geraldinepascal/FROGS-wrappers/ commit 56a8d94cd18a5b89f83ccfa9cdc7c80a28d044d4-dirty"
oinizan
parents:
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7 <column name="name" />
493202ba3af5 "planemo upload for repository https://github.com/geraldinepascal/FROGS-wrappers/ commit 56a8d94cd18a5b89f83ccfa9cdc7c80a28d044d4-dirty"
oinizan
parents:
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8 <column name="path" output_ref="output">
493202ba3af5 "planemo upload for repository https://github.com/geraldinepascal/FROGS-wrappers/ commit 56a8d94cd18a5b89f83ccfa9cdc7c80a28d044d4-dirty"
oinizan
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9 <move type="directory" relativize_symlinks="False">
493202ba3af5 "planemo upload for repository https://github.com/geraldinepascal/FROGS-wrappers/ commit 56a8d94cd18a5b89f83ccfa9cdc7c80a28d044d4-dirty"
oinizan
parents:
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10 <source>#echo "/".join(str($path).split('/')[:-1])#</source>
493202ba3af5 "planemo upload for repository https://github.com/geraldinepascal/FROGS-wrappers/ commit 56a8d94cd18a5b89f83ccfa9cdc7c80a28d044d4-dirty"
oinizan
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11 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">frogs_db/#echo str($path).split('/')[-2]#/</target>
493202ba3af5 "planemo upload for repository https://github.com/geraldinepascal/FROGS-wrappers/ commit 56a8d94cd18a5b89f83ccfa9cdc7c80a28d044d4-dirty"
oinizan
parents:
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12 </move>
493202ba3af5 "planemo upload for repository https://github.com/geraldinepascal/FROGS-wrappers/ commit 56a8d94cd18a5b89f83ccfa9cdc7c80a28d044d4-dirty"
oinizan
parents:
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13 <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/frogs_db/#echo "/".join(str($path).split('/')[-2:])#</value_translation>
493202ba3af5 "planemo upload for repository https://github.com/geraldinepascal/FROGS-wrappers/ commit 56a8d94cd18a5b89f83ccfa9cdc7c80a28d044d4-dirty"
oinizan
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14 <value_translation type="function">abspath</value_translation>
493202ba3af5 "planemo upload for repository https://github.com/geraldinepascal/FROGS-wrappers/ commit 56a8d94cd18a5b89f83ccfa9cdc7c80a28d044d4-dirty"
oinizan
parents:
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15 </column>
493202ba3af5 "planemo upload for repository https://github.com/geraldinepascal/FROGS-wrappers/ commit 56a8d94cd18a5b89f83ccfa9cdc7c80a28d044d4-dirty"
oinizan
parents:
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16 </output>
493202ba3af5 "planemo upload for repository https://github.com/geraldinepascal/FROGS-wrappers/ commit 56a8d94cd18a5b89f83ccfa9cdc7c80a28d044d4-dirty"
oinizan
parents:
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17 </data_table>
493202ba3af5 "planemo upload for repository https://github.com/geraldinepascal/FROGS-wrappers/ commit 56a8d94cd18a5b89f83ccfa9cdc7c80a28d044d4-dirty"
oinizan
parents:
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18 </data_manager>
493202ba3af5 "planemo upload for repository https://github.com/geraldinepascal/FROGS-wrappers/ commit 56a8d94cd18a5b89f83ccfa9cdc7c80a28d044d4-dirty"
oinizan
parents:
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19 </data_managers>