Mercurial > repos > oinizan > data_manager_frogs

diff data_manager_conf.xml @ 0:493202ba3af5 draft

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"planemo upload for repository https://github.com/geraldinepascal/FROGS-wrappers/ commit 56a8d94cd18a5b89f83ccfa9cdc7c80a28d044d4-dirty"
author oinizan
date Wed, 18 Aug 2021 15:24:49 +0000
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/data_manager_conf.xml	Wed Aug 18 15:24:49 2021 +0000
@@ -0,0 +1,19 @@
+<?xml version="1.0"?>
+<data_managers>
+    <data_manager tool_file="data_manager/FROGS_data_manager.xml" id="frogs_data_manager">
+        <data_table name="frogs_db">
+            <output>
+                <column name="value" />
+                <column name="name" />
+                <column name="path" output_ref="output">
+                    <move type="directory" relativize_symlinks="False">
+                        <source>#echo "/".join(str($path).split('/')[:-1])#</source>
+                        <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">frogs_db/#echo str($path).split('/')[-2]#/</target>
+                    </move>
+                    <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/frogs_db/#echo "/".join(str($path).split('/')[-2:])#</value_translation>
+                    <value_translation type="function">abspath</value_translation>
+                </column>
+            </output>
+        </data_table>
+    </data_manager>
+</data_managers>