Mercurial > repos > nikos > package_rna_probing_0_99_0

changeset 7:ae465f16e448 draft

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Uploaded
author nikos
date Wed, 11 Feb 2015 11:09:13 -0500
parents 1e279c5891e2
children 0455dc195eea
files tool_dependencies.xml
diffstat 1 files changed, 4 insertions(+), 1 deletions(-) [+]
line wrap: on
line diff
--- a/tool_dependencies.xml	Wed Feb 11 08:34:21 2015 -0500
+++ b/tool_dependencies.xml	Wed Feb 11 11:09:13 2015 -0500
@@ -1,7 +1,7 @@
 <?xml version="1.0"?>
 <tool_dependency>
     <set_environment version="1.0">
-        <environment_variable action="set_to" name="RNAprobR_PATH">$INSTALL_DIR</environment_variable>
+        <environment_variable action="set_to" name="RNAprobR_PATH">$REPOSITORY_INSTALL_DIR</environment_variable>
     </set_environment>
     <package name="R_3_1_1" version="3.1.1">
         <repository changeset_revision="d9964efbfbe3" name="package_r_3_1_1" owner="fubar" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
@@ -51,6 +51,9 @@
                     <package>https://bitbucket.org/nikos_sidiropoulos/source_packages/raw/master/RNAprobing-1.0.0/RNAprobR_0.99.1.tar.gz</package>
                     <package>https://bitbucket.org/nikos_sidiropoulos/source_packages/raw/master/RNAprobing-1.0.0/getopt_1.20.0.tar.gz</package>
                 </action>
+                <action type="set_environment">
+                    <environment_variable action="prepend_to" name="R_LIBS">$INSTALL_DIR</environment_variable>
+                </action>
             </actions>
         </install>
         <readme>