Mercurial > repos > nikos > bigwig_to_wig

changeset 26:ab63c4a9a592 draft

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Uploaded
author nikos
date Tue, 05 Aug 2014 08:40:51 -0400
parents 8846221ed014
children 6eb0c71ef584
files bigwig_to_wig.xml tool_dependencies.xml
diffstat 2 files changed, 12 insertions(+), 16 deletions(-) [+]
line wrap: on
line diff
--- a/bigwig_to_wig.xml	Tue Aug 05 08:04:47 2014 -0400
+++ b/bigwig_to_wig.xml	Tue Aug 05 08:40:51 2014 -0400
@@ -2,8 +2,8 @@
     <description>converter</description>
     <command>bigwig_to_wig.sh -f $input -b $bin_size -l $mylab > $output </command>
   <requirements>
-      <requirement type="package">bigWigSummary</requirement>
-      <requirement type="package">bigWigInfo</requirement>
+      <requirement type="package" version="1.0">bigWigSummary</requirement>
+      <requirement type="package" version="1.0">bigWigInfo</requirement>
   </requirements>
   <inputs>
       <param format="bigwig" name="input" type="data" label="BigWig file to convert" />
--- a/tool_dependencies.xml	Tue Aug 05 08:04:47 2014 -0400
+++ b/tool_dependencies.xml	Tue Aug 05 08:40:51 2014 -0400
@@ -1,8 +1,8 @@
 <?xml version="1.0"?>
 <tool_dependency>
-    <package name="bigWigSummary">
+    <package name="bigWigSummary" version="1.0">
         <install version="1.0">
-            <actions os="linux">
+            <actions>
                 <action type="download_binary"><url_template>http://hgdownload.soe.ucsc.edu/admin/exe/linux.x86_64/bigWigSummary</url_template></action>
 	        <action type="move_directory_files">
         	    <source_directory>.</source_directory>
@@ -16,22 +16,18 @@
         <readme>
         </readme>
     </package>
-    <package name="bigWigInfo">
+    <package name="bigWigInfo" version="1.0">
         <install version="1.0">
-            <actions_group>
-                <actions os="linux" architecture="x86_64">
-                    <action type="download_binary"><url_template>http://hgdownload.soe.ucsc.edu/admin/exe/linux.x86_64/bigWigInfo</url_template></action>
-                    <action type="move_directory_files">
-                        <source_directory>.</source_directory>
-                        <destination_directory>$INSTALL_DIR</destination_directory>
-                    </action>
-                </actions>
-
-
+            <actions>
+                <action type="download_binary"><url_template>http://hgdownload.soe.ucsc.edu/admin/exe/linux.x86_64/bigWigInfo</url_template></action>
+                <action type="move_directory_files">
+                    <source_directory>.</source_directory>
+                    <destination_directory>$INSTALL_DIR</destination_directory>
+                </action>
                 <action type="set_environment">
                     <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR</environment_variable>
                 </action>
-            </actions_group>
+            </actions>
         </install>
         <readme>
         </readme>