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changeset 2:71ace43428ca draft

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planemo upload commit 801bf168032a13f6405518bddb35a24c9e9a8cd4-dirty
author nick
date Mon, 23 Nov 2015 17:57:34 -0500
parents 9bafe0c4bfa0
children 13bcc2f459b0
files make_families.xml
diffstat 1 files changed, 1 insertions(+), 1 deletions(-) [+]
line wrap: on
line diff
--- a/make_families.xml	Mon Nov 23 17:46:39 2015 -0500
+++ b/make_families.xml	Mon Nov 23 17:57:34 2015 -0500
@@ -3,7 +3,7 @@
   <description>from duplex sequencing data</description>
   <command>paste $fastq1 $fastq2
     | paste - - - -
-    | awk -f $DUPLEX_DIR/make-barcodes.awk -v TAG_LEN=$taglen -v INVARIANT=$invariant
+    | awk -f \$DUPLEX_DIR/make-barcodes.awk -v TAG_LEN=$taglen -v INVARIANT=$invariant
     | sort
     &gt; $output
   </command>