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view mafft/test/sample.parttree @ 18:e4d75f9efb90 draft
planemo upload commit b'4303231da9e48b2719b4429a29b72421d24310f4\n'-dirty
| author | nick |
|---|---|
| date | Thu, 02 Feb 2017 18:44:31 -0500 |
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> 1== M63632 1 Lampetra japonica rhodopsin <>[BBRC174,1125-1132'91] MNG--------------------------------------------------------- -TE--GDNFYVPF-----------------SNKTGLARSPYEYPQ---------Y-YLAE PWK---------YSALAAYMFFLILVGFPVNFLTLFVTVQHKKLRTPLNYILLNLAMANL FMVLFG-FTVTMYTS-MN-GYFV--FGPTMCSIEGFFATLGGEVALWSLVVLAIERYIVI CKPMGN-FRFGNTHAIMGVAFTWIMALAC-AAPPLVG-W-----SRYIPEGMQCSCGPDY YTLNPNFNNESYVVYMFVVHFLVPFVIIFFCYGRLLCTV----KE--------------- ------------------------------------------------------------ -----------------------------------------------------------A AAAQQ---------------------------------ESASTQKAEKEVTRMVVLMVIG FLVCWVPYASVAFYIFT-HQGS--DFGATFMTLPAFFAKSSALYNPVIYILMNKQFRNCM ITTLC----C---GKNPLGD-DE--SGASTSKTEV------------------------- --------------------------------------------------------SSVS -------TSPVSP-A---------- > 2== U22180 1 rat opsin <rod>[J.Mol.Neurosci.5(3),207-209'94] MNG--------------------------------------------------------- -TE--GPNFYVPF-----------------SNITGVVRSPFEQPQ---------Y-YLAE PWQ---------FSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADL FMVFGG-FTTTLYTS-LH-GYFV--FGPTGCNLEGFFATLGGEIGLWSLVVLAIERYVVV CKPMSN-FRFGENHAIMGVAFTWVMALAC-AAPPLVG-W-----SRYIPEGMQCSCGIDY YTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTV----KE--------------- ------------------------------------------------------------ -----------------------------------------------------------A AAQQQ---------------------------------ESATTQKAEKEVTRMVIIMVIF FLICWLPYASVAMYIFT-HQGS--NFGPIFMTLPAFFAKTASIYNPIIYIMMNKQFRNCM LTSLC----C---GKNPLGD-DE--ASATASKTE-------------------------- ------------------------------------------------------------ -------TSQVAP-A---------- > 3== M92038 1 chicken green sensitive cone opsin <retina>[PNAS89,5932-5936'9 MNG--------------------------------------------------------- -TE--GINFYVPM-----------------SNKTGVVRSPFEYPQ---------Y-YLAE PWK---------YRLVCCYIFFLISTGLPINLLTLLVTFKHKKLRQPLNYILVNLAVADL FMACFG-FTVTFYTA-WN-GYFV--FGPVGCAVEGFFATLGGQVALWSLVVLAIERYIVV CKPMGN-FRFSATHAMMGIAFTWVMAFSC-AAPPLFG-W-----SRYMPEGMQCSCGPDY YTHNPDYHNESYVLYMFVIHFIIPVVVIFFSYGRLICKV----RE--------------- ------------------------------------------------------------ -----------------------------------------------------------A AAQQQ---------------------------------ESATTQKAEKEVTRMVILMVLG FMLAWTPYAVVAFWIFT-NKGA--DFTATLMAVPAFFSKSSSLYNPIIYVLMNKQFRNCM ITTIC----C---GKNPFGD-EDVSSTVSQSKTEV------------------------- --------------------------------------------------------SSVS -------SSQVSP-A---------- > 4=p A45229 opsin, green-sensitive (clone GFgr-1) - goldfish MNG--------------------------------------------------------- -TE--GKNFYVPM-----------------SNRTGLVRSPFEYPQ---------Y-YLAE PWQ---------FKILALYLFFLMSMGLPINGLTLVVTAQHKKLRQPLNFILVNLAVAGT IMVCFG-FTVTFYTA-IN-GYFV--LGPTGCAVEGFMATLGGEVALWSLVVLAIERYIVV CKPMGS-FKFSSSHAFAGIAFTWVMALAC-AAPPLFG-W-----SRYIPEGMQCSCGPDY YTLNPDYNNESYVIYMFVCHFILPVAVIFFTYGRLVCTV----KA--------------- ------------------------------------------------------------ -----------------------------------------------------------A AAQQQ---------------------------------DSASTQKAEREVTKMVILMVFG FLIAWTPYATVAAWIFF-NKGA--DFSAKFMAIPAFFSKSSALYNPVIYVLLNKQFRNCM LTTIF----C---GKNPLGD-DE-SSTVSTSKTEV------------------------- --------------------------------------------------------SS-- ----------VSP-A---------- > 5=p B45229 opsin, green-sensitive (clone GFgr-2) - goldfish MNG--------------------------------------------------------- -TE--GNNFYVPL-----------------SNRTGLVRSPFEYPQ---------Y-YLAE PWQ---------FKLLAVYMFFLICLGLPINGLTLICTAQHKKLRQPLNFILVNLAVAGA IMVCFG-FTVTFYTA-IN-GYFA--LGPTGCAVEGFMATLGGEVALWSLVVLAIERYIVV CKPMGS-FKFSSTHASAGIAFTWVMAMAC-AAPPLVG-W-----SRYIPEGIQCSCGPDY YTLNPEYNNESYVLYMFICHFILPVTIIFFTYGRLVCTV----KA--------------- ------------------------------------------------------------ -----------------------------------------------------------A AAQQQ---------------------------------DSASTQKAEREVTKMVILMVLG FLVAWTPYATVAAWIFF-NKGA--AFSAQFMAIPAFFSKTSALYNPVIYVLLNKQFRSCM LTTLF----C---GKNPLGD-EE-SSTVSTSKTEV------------------------- --------------------------------------------------------SS-- ----------VSP-A---------- > 6== L11864 1 Carassius auratus blue cone opsin <retina>[Biochemistry32,208- MKQ--------------------------------------------------------- -VPEFHEDFYIPIPL-------------DINNLS--AYSPFLVPQ---------D-HLGN QGI---------FMAMSVFMFFIFIGGASINILTILCTIQFKKLRSHLNYILVNLSIANL FVAIFG-SPLSFYSF-FN-RYFI--FGATACKIEGFLATLGGMVGLWSLAVVAFERWLVI CKPLGN-FTFKTPHAIAGCILPWISALAA-SLPPLFG-W-----SRYIPEGLQCSCGPDW YTTNNKYNNESYVMFLFCFCFAVPFGTIVFCYGQLLITL----KL--------------- ------------------------------------------------------------ -----------------------------------------------------------A AKAQA---------------------------------DSASTQKAEREVTKMVVVMVLG FLVCWAPYASFSLWIVS-HRGE--EFDLRMATIPSCLSKASTVYNPVIYVLMNKQFRSCM M-KMV----C---GKN-IEE-DE--ASTSSQVTQV------------------------- --------------------------------------------------------SS-- ----------VAPEK---------- > 7== M13299 1 human BCP <>[Science232(4747),193-202'86] MRK--------------------------------------------------------- -MS--EEEFYL------------------FKNISSV--GPWDGPQ---------Y-HIAP VWA---------FYLQAAFMGTVFLIGFPLNAMVLVATLRYKKLRQPLNYILVNVSFGGF LLCIFS-VFPVFVAS-CN-GYFV--FGRHVCALEGFLGTVAGLVTGWSLAFLAFERYIVI CKPFGN-FRFSSKHALTVVLATWTIGIGV-SIPPFFG-W-----SRFIPEGLQCSCGPDW YTVGTKYRSESYTWFLFIFCFIVPLSLICFSYTQLLRAL----KA--------------- ------------------------------------------------------------ -----------------------------------------------------------V AAQQQ---------------------------------ESATTQKAEREVSRMVVVMVGS FCVCYVPYAAFAMYMVN-NRNH--GLDLRLVTIPSFFSKSACIYNPIIYCFMNKQFQACI M-KMV----C---GKA-MTD-ES--DTCSSQKTEV------------------------- --------------------------------------------------------STVS -------STQVGP-N---------- > 8=opsin, greensensitive human (fragment) S07060 ------------------------------------------------------------ ------------------------------------------------------------ ----------------------------------------------------------DL AETVIA-STISIVNQ-VS-GYFV--LGHPMCVLEGYTVSLCGITGLWSLAIISWERWLVV CKPFGN-VRFDAKLAIVGIAFSWIWAAVW-TAPPIFG-W-----SRYWPHGLKTSCGPDV FSGSSYPGVQSYMIVLMVTCCITPLSIIVLCYLQVWLAI----RA--------------- ------------------------------------------------------------ -----------------------------------------------------------V AKQQK---------------------------------ESESTQKAEKEVTRMVVVMVLA FC---------------------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------- > 9== K03494 1 human GCP <>[Science232(4747),193-202'86] MAQQWSLQRLA---------------------------------------GRHPQDSYED STQ--SSIFTYTN-----------------SNST---RGPFEGPN---------Y-HIAP RWV---------YHLTSVWMIFVVIASVFTNGLVLAATMKFKKLRHPLNWILVNLAVADL AETVIA-STISVVNQ-VY-GYFV--LGHPMCVLEGYTVSLCGITGLWSLAIISWERWMVV CKPFGN-VRFDAKLAIVGIAFSWIWAAVW-TAPPIFG-W-----SRYWPHGLKTSCGPDV FSGSSYPGVQSYMIVLMVTCCITPLSIIVLCYLQVWLAI----RA--------------- ------------------------------------------------------------ -----------------------------------------------------------V AKQQK---------------------------------ESESTQKAEKEVTRMVVVMVLA FCFCWGPYAFFACFAAA-NPGY--PFHPLMAALPAFFAKSATIYNPVIYVFMNRQFRNCI LQLF---------GKK-VDD-GS--ELSSASKTEV------------------------- --------------------------------------------------------SSV- --------SSVSP-A---------- > 10== Z68193 1 human Red Opsin <>[] MAQQWSLQRLA---------------------------------------GRHPQDSYED STQ--SSIFTYTN-----------------SNST---RGPFEGPN---------Y-HIAP RWV---------YHLTSVWMIFVVTASVFTNGLVLAATMKFKKLRHPLNWILVNLAVADL AETVIA-STISIVNQ-VS-GYFV--LGHPMCVLEGYTVSLCGITGLWSLAIISWERWLVV CKPFGN-VRFDAKLAIVGIAFSWIWSAVW-TAPPIFG-W-----SRYWPHGLKTSCGPDV FSGSSYPGVQSYMIVLMVTCCIIPLAIIMLCYLQVWLAI----RA--------------- ------------------------------------------------------------ -----------------------------------------------------------V AKQQK---------------------------------ESESTQKAEKEVTRMVVVMIFA YCVCWGPYTFFACFAAA-NPGY--AFHPLMAALPAYFAKSATIYNPVIYVFMNRQFRNCI LQLF---------GKK-VDD-GS--ELSSASKTEV------------------------- --------------------------------------------------------SSV- --------SSVSP-A---------- > 11== M92036 1 Gecko gecko P521 <retina>[PNAS89,6841-6845'92] MTEAWNVAVFA---------------------------------------ARRSRDD-DD TTR--GSVFTYTN-----------------TNNT---RGPFEGPN---------Y-HIAP RWV---------YNLVSFFMIIVVIASCFTNGLVLVATAKFKKLRHPLNWILVNLAFVDL VETLVA-STISVFNQ-IF-GYFI--LGHPLCVIEGYVVSSCGITGLWSLAIISWERWFVV CKPFGN-IKFDSKLAIIGIVFSWVWAWGW-SAPPIFG-W-----SRYWPHGLKTSCGPDV FSGSVELGCQSFMLTLMITCCFLPLFIIIVCYLQVWMAI----RA--------------- ------------------------------------------------------------ -----------------------------------------------------------V AAQQK---------------------------------ESESTQKAEREVSRMVVVMIVA FCICWGPYASFVSFAAA-NPGY--AFHPLAAALPAYFAKSATIYNPVIYVFMNRQFRNCI MQLF---------GKK-VDD-GS--EASTTSRTEV------------------------- --------------------------------------------------------SSVS -------NSSVAP-A---------- > 12== M62903 1 chicken visual pigment <>[BBRC173,1212-1217'90] MAA-WEAAFAA---------------------------------------RRRHEE--ED TTR--DSVFTYTN-----------------SNNT---RGPFEGPN---------Y-HIAP RWV---------YNLTSVWMIFVVAASVFTNGLVLVATWKFKKLRHPLNWILVNLAVADL GETVIA-STISVINQ-IS-GYFI--LGHPMCVVEGYTVSACGITALWSLAIISWERWFVV CKPFGN-IKFDGKLAVAGILFSWLWSCAW-TAPPIFG-W-----SRYWPHGLKTSCGPDV FSGSSDPGVQSYMVVLMVTCCFFPLAIIILCYLQVWLAI----RA--------------- ------------------------------------------------------------ -----------------------------------------------------------V AAQQK---------------------------------ESESTQKAEKEVSRMVVVMIVA YCFCWGPYTFFACFAAA-NPGY--AFHPLAAALPAYFAKSATIYNPIIYVFMNRQFRNCI LQLF---------GKK-VDD-GS--EVST-SRTEV------------------------- --------------------------------------------------------SSVS -------NSSVSP-A---------- > 13== S75720 1 chicken P-opsin <>[Science267(5203),1502-1506'95] MS--------------------------------------------------------SN SSQ--AP-----------------------PNGT---PGPFDGPQ---------WPYQAP QST---------YVGVAVLMGTVVACASVVNGLVIVVSICYKKLRSPLNYILVNLAVADL LVTLCG-SSVSLSNN-IN-GFFV--FGRRMCELEGFMVSLTGIVGLWSLAILALERYVVV CKPLGD-FQFQRRHAVSGCAFTWGWALLW-SAPPLLG-W-----SSYVPEGLRTSCGPNW YTGGSNN--NSYILSLFVTCFVLPLSLILFSYTNLLLTL----RA--------------- ------------------------------------------------------------ -----------------------------------------------------------A AAQQK---------------------------------EADTTQRAEREVTRMVIVMVMA FLLCWLPYSTFALVVAT-HKGI--IIQPVLASLPSYFSKTATVYNPIIYVFMNKQFQSCL LEMLC----CGYQPQR-TGK-AS--PGTPGPHADV------------------------- --------------------------------------------------------TAAG ------LRNKVMP-AH-------PV > 14== M17718 1 D.melanogaster Rh3 <>[J.Neurosci.7,1550-1557'87] MESGNVS-----------------------------------------------SSLFGN VSTALRPEARLSA---ETRLL----GW----------NVPPEELR-----------HIPE HWLTYPEPPESMNYLLGTLYIFFTLMSMLGNGLVIWVFSAAKSLRTPSNILVINLAFCDF MMMVK--TPIFIYNS-FH-QGYA--LGHLGCQIFGIIGSYTGIAAGATNAFIAYDRFNVI TRPMEG--KMTHGKAIAMIIFIYMYATPW-VVACYTETW-----GRFVPEGYLTSCTFDY LT--DNFDTRLFVACIFFFSFVCPTTMITYYYSQIVGHVFSHEKA--------------- ------------------------------------------------------------ -----------------------------------------------------------L RDQAKK--------------------MNVESL---RSNVDKNKETAEIRIAKAAITICFL FFCSWTPYGVMSLIGAF-GDKT--LLTPGATMIPACACKMVACIDPFVYAISHPRYRMEL QKRCP----WLALNEKAPE--SS-AVASTSTTQEP------------------------- ------------------------------------------------------------ --------QQTTA-A---------- > 15== X65879 1 Drosophila pseudoobscura Dpse\Rh3 <>[Genetics132(1),193-204'92 MEYHNVS-----------------------------------------------SVL-GN VSSVLRPDARLSA---ESRLL----GW----------NVPPDELR-----------HIPE HWLIYPEPPESMNYLLGTLYIFFTVISMIGNGLVMWVFSAAKSLRTPSNILVINLAFCDF MMMIK--TPIFIYNS-FH-QGYA--LGHLGCQIFGVIGSYTGIAAGATNAFIAYDRYNVI TRPMEG--KMTHGKAIAMIIFIYLYATPW-VVACYTESW-----GRFVPEGYLTSCTFDY LT--DNFDTRLFVACIFFFSFVCPTTMITYYYSQIVGHVFSHEKA--------------- ------------------------------------------------------------ -----------------------------------------------------------L RDQAKK--------------------MNVDSL---RSNVDKSKEAAEIRIAKAAITICFL FFASWTPYGVMSLIGAF-GDKT--LLTPGATMIPACTCKMVACIDPFVYAISHPRYRMEL QKRCP----WLAISEKAPE--SR-AAISTSTTQEQ------------------------- ------------------------------------------------------------ --------QQTTA-A---------- > 16== M17730 1 D.melanogaster Rh4 opsin <>[J.Neurosci.7,1558-1566'87] ME-----------------------------------------------------PLCNA SEPPLRPEAR-SSGNGDLQFL----GW----------NVPPDQIQ-----------YIPE HWLTQLEPPASMHYMLGVFYIFLFCASTVGNGMVIWIFSTSKSLRTPSNMFVLNLAVFDL IMCLK--APIF--NS-FH-RGFAIYLGNTWCQIFASIGSYSGIGAGMTNAAIGYDRYNVI TKPMNR--NMTFTKAVIMNIIIWLYCTPW-VVLPLTQFW-----DRFVPEGYLTSCSFDY LS--DNFDTRLFVGTIFFFSFVCPTLMILYYYSQIVGHVFSHEKA--------------- ------------------------------------------------------------ -----------------------------------------------------------L REQAKK--------------------MNVESL---RSNVDKSKETAEIRIAKAAITICFL FFVSWTPYGVMSLIGAF-GDKS--LLTQGATMIPACTCKLVACIDPFVYAISHPRYRLEL QKRCP----WLGVNEKSGE--IS-SAQST-TTQEQ------------------------- ------------------------------------------------------------ --------QQTTA-A---------- > 17== X65880 1 Drosophila pseudoobscura Dpse\Rh4 <>[Genetics132(1),193-204'92 MD-----------------------------------------------------ALCNA SEPPLRPEARMSSGSDELQFL----GW----------NVPPDQIQ-----------YIPE HWLTQLEPPASMHYMLGVFYIFLFFASTLGNGMVIWIFSTSKSLRTPSNMFVLNLAVFDL IMCLK--APIFIYNS-FH-RGFA--LGNTWCQIFASIGSYSGIGAGMTNAAIGYDRYNVI TKPMNR--NMTFTKAVIMNIIIWLYCTPW-VVLPLTQFW-----DRFVPEGYLTSCSFDY LS--DNFDTRLFVGTIFLFSFVVPTLMILYYYSQIVGHVFNHEKA--------------- ------------------------------------------------------------ -----------------------------------------------------------L REQAKK--------------------MNVESL---RSNVDKSKETAEIRIAKAAITICFL FFVSWTPYGVMSLIGAF-GDKS--LLTPGATMIPACTCKLVACIEPFVYAISHPRYRMEL QKRCP----WLGVNEKSGE--AS-SAQST-TTQEQ------------------------- ------------------------------------------------------------ -------TQQTSA-A---------- > 18== D50584 1 Hemigrapsus sanguineus opsin BcRh2 <compound eye>[J.Exp.Biol.1 MT---------------------------------------------------------- --NATGPQMAYYGAASMD-FG-------YPEGVSIVDFVRPEIKP-----------YVHQ HWYNYPPVNPMWHYLLGVIYLFLGTVSIFGNGLVIYLFNKSAALRTPANILVVNLALSDL IMLTTN-VPFFTYNC-FSGGVWM--FSPQYCEIYACLGAITGVCSIWLLCMISFDRYNII CNGFNG-PKLTTGKAVVFALISWVIAIGC-ALPPFFG-W-----GNYILEGILDSCSYDY LT--QDFNTFSYNIFIFVFDYFLPAAIIVFSYVFIVKAIFAHEAA--------------- ------------------------------------------------------------ -----------------------------------------------------------M RAQAKK--------------------MNVSTL---RS-NEADAQRAEIRIAKTALVNVSL WFICWTPYALISLKGVM-GDTS--GITPLVSTLPALLAKSCSCYNPFVYAISHPKYRLAI TQHLP----WFCVHETETKS-ND-DSQSNSTVAQ-------------------------- ------------------------------------------------------------ -----------DK-A---------- > 19== D50583 1 Hemigrapsus sanguineus opsin BcRh1 <compound eye>[J.Exp.Biol.1 MA---------------------------------------------------------- --NVTGPQMAFYGSGAAT-FG-------YPEGMTVADFVPDRVKH-----------MVLD HWYNYPPVNPMWHYLLGVVYLFLGVISIAGNGLVIYLYMKSQALKTPANMLIVNLALSDL IMLTTN-FPPFCYNC-FSGGRWM--FSGTYCEIYAALGAITGVCSIWTLCMISFDRYNII CNGFNG-PKLTQGKATFMCGLAWVISVGW-SLPPFFG-W-----GSYTLEGILDSCSYDY FT--RDMNTITYNICIFIFDFFLPASVIVFSYVFIVKAIFAHEAA--------------- ------------------------------------------------------------ -----------------------------------------------------------M RAQAKK--------------------MNVTNL---RS-NEAETQRAEIRIAKTALVNVSL WFICWTPYAAITIQGLL-GNAE--GITPLLTTLPALLAKSCSCYNPFVYAISHPKFRLAI TQHLP----WFCVHEKDPND-VE-ENQSSNTQTQ-------------------------- ------------------------------------------------------------ -----------EK-S---------- > 20== K02320 1 D.melanogaster opsin <>[Cell40,851-858'85] ME------------------------------------------------------SFAV AAAQLGPHFAPLS------------------NGSVVDKVTPDMAH-----------LISP YWNQFPAMDPIWAKILTAYMIMIGMISWCGNGVVIYIFATTKSLRTPANLLVINLAISDF GIMITN-TPMMGINL-YF-ETWV--LGPMMCDIYAGLGSAFGCSSIWSMCMISLDRYQVI VKGMAG-RPMTIPLALGKM---------------------------YVPEGNLTSCGIDY LE--RDWNPRSYLIFYSIFVYYIPLFLICYSYWFIIAAVSAHEKA--------------- ------------------------------------------------------------ -----------------------------------------------------------M REQAKK--------------------MNVKSL---RS-SEDAEKSAEGKLAKVALVTITL WFMAWTPYLVINCMGLF-KF-E--GLTPLNTIWGACFAKSAACYNPIVYGISHPKYRLAL KEKCP----CCVFGKVDDGK-SS-DAQSQATASEA------------------------- --------------------------------------------------------E--- -----------SK-A---------- > 21== K02315 1 D.melanogaster ninaE <>[Cell40,839-850'85] ME------------------------------------------------------SFAV AAAQLGPHFAPLS------------------NGSVVDKVTPDMAH-----------LISP YWNQFPAMDPIWAKILTAYMIMIGMISWCGNGVVIYIFATTKSLRTPANLLVINLAISDF GIMITN-TPMMGINL-YF-ETWV--LGPMMCDIYAGLGSAFGCSSIWSMCMISLDRYQVI VKGMAG-RPMTIPLALGKIAYIWFMSSIW-CLAPAFG-W-----SRYVPEGNLTSCGIDY LE--RDWNPRSYLIFYSIFVYYIPLFLICYSYWFIIAAVSAHEKA--------------- ------------------------------------------------------------ -----------------------------------------------------------M REQAKK--------------------MNVKSL---RS-SEDAEKSAEGKLAKVALVTITL WFMAWTPYLVINCMGLF-KF-E--GLTPLNTIWGACFAKSAACYNPIVYGISHPKYRLAL KEKCP----CCVFGKVDDGK-SS-DAQSQATASEA------------------------- --------------------------------------------------------E--- -----------SK-A---------- > 22== X65877 1 Drosophila pseudoobscura Dpse\ninaE <>[Genetics132(1),193-204' MD------------------------------------------------------SFAA VATQLGPQFAAPS------------------NGSVVDKVTPDMAH-----------LISP YWDQFPAMDPIWAKILTAYMIIIGMISWCGNGVVIYIFATTKSLRTPANLLVINLAISDF GIMITN-TPMMGINL-YF-ETWV--LGPMMCDIYAGLGSAFGCSSIWSMCMISLDRYQVI VKGMAG-RPMTIPLALGKIAYIWFMSTIWCCLAPVFG-W-----SRYVPEGNLTSCGIDY LE--RDWNPRSYLIFYSIFVYYIPLFLICYSYWFIIAAVSAHEKA--------------- ------------------------------------------------------------ -----------------------------------------------------------M REQAKK--------------------MNVKSL---RS-SEDADKSAEGKLAKVALVTISL WFMAWTPYLVINCMGLF-KF-E--GLTPLNTIWGACFAKSAACYNPIVYGISHPKYRLAL KEKCP----CCVFGKVDDGK-SS-EAQSQATTSEA------------------------- --------------------------------------------------------E--- -----------SK-A---------- > 23== M12896 1 D.melanogaster Rh2 <>[Cell44,705-710'86] MERSHL-------------------------------------------------PETPF DLAHSGPRFQAQSSG----------------NGSVLDNVLPDMAH-----------LVNP YWSRFAPMDPMMSKILGLFTLAIMIISCCGNGVVVYIFGGTKSLRTPANLLVLNLAFSDF CMMASQ-SPVMIINF-YY-ETWV--LGPLWCDIYAGCGSLFGCVSIWSMCMIAFDRYNVI VKGING-TPMTIKTSIMKILFIWMMAVFW-TVMPLIG-W-----SAYVPEGNLTACSIDY MT--RMWNPRSYLITYSLFVYYTPLFLICYSYWFIIAAVAAHEKA--------------- ------------------------------------------------------------ -----------------------------------------------------------M REQAKK--------------------MNVKSL---RS-SEDCDKSAEGKLAKVALTTISL WFMAWTPYLVICYFGLF-KI-D--GLTPLTTIWGATFAKTSAVYNPIVYGISHPKYRIVL KEKCP----MCVFGNTDEPKPDA-PASDTETTSEA------------------------- --------------------------------------------------------D--- -----------SK-A---------- > 24== X65878 1 Drosophila pseudoobscura Dpse\Rh2 <>[Genetics132(1),193-204'92 MERSLL-------------------------------------------------PEPPL AMALLGPRFEAQTGG----------------NRSVLDNVLPDMAP-----------LVNP HWSRFAPMDPTMSKILGLFTLVILIISCCGNGVVVYIFGGTKSLRTPANLLVLNLAFSDF CMMASQ-SPVMIINF-YY-ETWV--LGPLWCDIYAACGSLFGCVSIWSMCMIAFDRYNVI VKGING-TPMTIKTSIMKIAFIWMMAVFW-TIMPLIG-W-----SSYVPEGNLTACSIDY MT--RQWNPRSYLITYSLFVYYTPLFMICYSYWFIIATVAAHEKA--------------- ------------------------------------------------------------ -----------------------------------------------------------M RDQAKK--------------------MNVKSL---RS-SEDCDKSAENKLAKVALTTISL WFMAWTPYLIICYFGLF-KI-D--GLTPLTTIWGATFAKTSAVYNPIVYGISHPNDRLVL KEKCP----MCVCGTTDEPKPDA-PPSDTETTSEA------------------------- --------------------------------------------------------E--- -----------SK-D---------- > 25== U26026 1 Apis mellifera long-wavelength rhodopsin <>[] MI---------------------------------------------------------- --AVSGPSYEAFSYGGQARF----------NNQTVVDKVPPDMLH-----------LIDA NWYQYPPLNPMWHGILGFVIGMLGFVSAMGNGMVVYIFLSTKSLRTPSNLFVINLAISNF LMMFCM-SPPMVINC-YY-ETWV--LGPLFCQIYAMLGSLFGCGSIWTMTMIAFDRYNVI VKGLSG-KPLSINGALIRIIAIWLFSLGW-TIAPMFG-W-----NRYVPEGNMTACGTDY FN--RGLLSASYLVCYGIWVYFVPLFLIIYSYWFIIQAVAAHEKN--------------- ------------------------------------------------------------ -----------------------------------------------------------M REQAKK--------------------MNVASL---RS-SENQNTSAECKLAKVALMTISL WFMAWTPYLVINFSGIF-NL-V--KISPLFTIWGSLFAKANAVYNPIVYGISHPKYRAAL FAKFP----SLAC-AAEPSS-DA-VSTTSGTTTVT------------------------- --------------------------------------------------------DNEK -----------SN-A---------- > 26== L03781 1 Limulus polyphemus opsin <>[PNAS90,6150-6154'93] M----------------------------------------------------------- ---ANQLSYSSLGWPYQP-------------NASVVDTMPKEMLY-----------MIHE HWYAFPPMNPLWYSILGVAMIILGIICVLGNGMVIYLMMTTKSLRTPTNLLVVNLAFSDF CMMAFM-MPTMTSNC-FA-ETWI--LGPFMCEVYGMAGSLFGCASIWSMVMITLDRYNVI VRGMAA-APLTHKKATLLLLFVWIWSGGW-TILPFFG-W-----SRYVPEGNLTSCTVDY LT--KDWSSASYVVIYGLAVYFLPLITMIYCYFFIVHAVAEHEKQ--------------- ------------------------------------------------------------ -----------------------------------------------------------L REQAKK--------------------MNVASL---RANADQQKQSAECRLAKVAMMTVGL WFMAWTPYLIISWAGVF-SSGT--RLTPLATIWGSVFAKANSCYNPIVYGISHPRYKAAL YQRFP----SLACGSGESGS-DV-KSEASATTTME------------------------- --------------------------------------------------------EKPK ----------IPE-A---------- > 27== X07797 1 Octopus dofleini rhodopsin <>[FEBS232(1),69-72'88] MVES-------------------------------------------------------- -------------------TTLVNQTWWY--NPTVD---------------------IHP HWAKFDPIPDAVYYSVGIFIGVVGIIGILGNGVVIYLFSKTKSLQTPANMFIINLAMSDL SFSAINGFPLKTISA-FM-KKWI--FGKVACQLYGLLGGIFGFMSINTMAMISIDRYNVI GRPMAASKKMSHRRAFLMIIFVWMWSIVW-SVGPVFN-W-----GAYVPEGILTSCSFDY LS--TDPSTRSFILCMYFCGFMLPIIIIAFCYFNIVMSVSNHEKE--------------- ------------------------------------------------------------ -----------------------------------------------------------M AAMAKR--------------------LNAKEL---R--KAQAGASAEMKLAKISMVIITQ FMLSWSPYAIIALLAQF-GPAE--WVTPYAAELPVLFAKASAIHNPIVYSVSHPKFREAI QTTFPWLLTCCQFDEKECED-AN-DAEEEVVASER--GGESRDAAQMKEMMAMMQKMQAQ QAAYQPPPPPQGY--PPQGYPPQGAYPPPQGYPPQGYPPQGYPPQGYPPQGAPPQVEAPQ GAPPQGVDNQAYQ-A---------- > 28== X70498 1 Todarodes pacificus rhodopsin <retina>[FEBS317(1-2),5-11'93] MGRD-------------------------------------------------------- -------------------LR-DNETWWY--NPSIV---------------------VHP HWREFDQVPDAVYYSLGIFIGICGIIGCGGNGIVIYLFTKTKSLQTPANMFIINLAFSDF TFSLVNGFPLMTISC-FL-KKWI--FGFAACKVYGFIGGIFGFMSIMTMAMISIDRYNVI GRPMAASKKMSHRRAFIMIIFVWLWSVLW-AIGPIFG-W-----GAYTLEGVLCNCSFDY IS--RDSTTRSNILCMFILGFFGPILIIFFCYFNIVMSVSNHEKE--------------- ------------------------------------------------------------ -----------------------------------------------------------M AAMAKR--------------------LNAKEL---R--KAQAGANAEMRLAKISIVIVSQ FLLSWSPYAVVALLAQF-GPLE--WVTPYAAQLPVMFAKASAIHNPMIYSVSHPKFREAI SQTFPWVLTCCQFDDKETED-DK-DAETEIPAGESSDAAPSADAAQMKEMMAMMQKMQQQ QAAY----PPQGYAPPPQGYPPQGY--PPQGYPPQGYPPQGYPP---PPQGAPPQ-GAPP AAPPQGVDNQAYQ-A---------- > 29== L21195 1 human serotonin 5-HT7 receptor protein <placenta and fetal bra MMDVNSSGRPDLY----GHLRSFLLP--EVGRGLPDLSPDGGADPVAGSWAPHLLS---E VTASPAPTW----------------------------DAPPDNAS--GCGEQINY----- --------GRVEKVVIGSILTLITLLTIAGNCLVVISVCFVKKLRQPSNYLIVSLALADL SVAVAV-MPFVSVTDLIG-GKWI--FGHFFCNVFIAMDVMCCTASIMTLCVISIDRYLGI TRPLTYPVRQNGKCMAKMILSVWLLSASI-TLPPLFG-W-----AQNVNDDK--VCLIS- -------QDFGYTIYSTAVAFYIPMSVMLFMYYQIYKAARKSAAKHKF------------ -----PGF---------------------------------PRVEPDSVI---------- ------------ALNGIVK----------------------LQKEVEECAN--------L SRLLKH-----------------------------ER-KNISIFKREQKAATTLGIIVGA FTVCWLPFFLLSTARPFICGTSCSCIPLWVERTFLWLGYANSLINPFIYAFFNRDLRTTY RSLLQ--------CQYRNIN----RKLSAAGMHEA-------------------LKLA-- --------------------------------------------------------ERPE ------RPEFVLQNADYCRKKGHDS > 30== L15228 1 rat 5HT-7 serotonin receptor <>[JBC268,18200-18204'93] M--------------------------------------------------PHLLSGFLE VTASPAPTW----------------------------DAPPDNVS--GCGEQINY----- --------GRVEKVVIGSILTLITLLTIAGNCLVVISVSFVKKLRQPSNYLIVSLALADL SVAVAV-MPFVSVTDLIG-GKWI--FGHFFCNVFIAMDVMCCTASIMTLCVISIDRYLGI TRPLTYPVRQNGKCMAKMILSVWLLSASI-TLPPLFG-W-----AQNVNDDK--VCLIS- -------QDFGYTIYSTAVAFYIPMSVMLFMYYQIYKAARKSAAKHKF------------ -----PGF---------------------------------PRVQPESVI---------- ------------SLNGVVK----------------------LQKEVEECAN--------L SRLLKH-----------------------------ER-KNISIFKREQKAATTLGIIVGA FTVCWLPFFLLSTARPFICGTSCSCIPLWVERTCLWLGYANSLINPFIYAFFNRDLRPTS RSLLQ--------CQYRNIN----RKLSAAGMHEA-------------------LKLA-- --------------------------------------------------------ERPE ------RSEFVLQNSDHCGKKGHDT > 31=p A47425 serotonin receptor 5HT-7 - rat M--------------------------------------------------PHLLSGFLE VTASPAPTW----------------------------DAPPDNVS--GCGEQINY----- --------GRVEKVVIGSILTLITLLTIAGNCLVVISVSFVKKLRQPSNYLIVSLALADL SVAVAV-MPFVSVTDLIG-GKWI--FGHFFCNVFIAMDVMCCTASIMTLCVISIDRYLGI TRPLTYPVRQNGKCMAKMILSVWLLSASI-TLPPLFG-W-----AQNVNDDK--VCLIS- -------QDFGYTIYSTAVAFYIPMSVMLFMYYQIYKAARKSAAKHKF------------ -----PGF---------------------------------PRVQPESVI---------- ------------SLNGVVK----------------------LQKEVEECAN--------L SRLLKH-----------------------------ER-KNISIFKREQKAATTLGIIVGA FTVCWLPFFLLSTARPFICGTSCSCIPLWVERTCLWLGYANSLINPFIYAFFNRDLRTTY RSLLQ--------CQYRNIN----RKLSAAGMHEA-------------------LKLA-- --------------------------------------------------------ERPE ------RSEFVLQNSDHCGKKGHDT > 32== M83181 1 human serotonin receptor <>[JBC267(11),7553-7562'92] M-DVLSPGQ--------GNNTTSPPAPFETGGNTTGI----------------------- --SDVTVSY--------------------------------------------------- ------------QVITSLLLGTLIFCAVLGNACVVAAIALERSLQNVANYLIGSLAVTDL MVSVLV-LPMAALYQ-VL-NKWT--LGQVTCDLFIALDVLCCTSSILHLCAIALDRYWAI TDPIDYVNKRTPRRAAALISLTWLIGFLI-SIPPMLG-WRTP--EDRSDPD---ACTIS- -------KDHGYTIYSTFGAFYIPLLLMLVLYGRIFRAARFRIRK--------------- ------------------------TVKKVEKTGADTRHGASPAPQPKKSVNGESGSRNWR LGVESKAGGAL-CANGAVRQGDDGAALEVIEVHRVGNSKEHLPLPSEAGPTPCAP----- ASFERK-----------NERNA-------------EA-KRKMALARERKTVKTLGIIMGT FILCWLPFFIVALVLPF-CESSC-HMPTLLGAIINWLGYSNSLLNPVIYAYFNKDFQNAF KKIIK--------CKFCR------------------------------------------ ------------------------------------------------------------ ------------------------Q > 33=p A35181 serotonin receptor class 1A - rat M-DVFSFGQ--------GNNTTASQEPFGTGGNVTSI----------------------- --SDVTFSY--------------------------------------------------- ------------QVITSLLLGTLIFCAVLGNACVVAAIALERSLQNVANYLIGSLAVTDL MVSVLV-LPMAALYQ-VL-NKWT--LGQVTCDLFIALDVLCCTSSILHLCAIALDRYWAI TDPIDYVNKRTPRRAAALISLTWLIGFLI-SIPPMLG-WRTP--EDRSDPD---ACTIS- -------KDHGYTIYSTFGAFYIPLLLMLVLYGRIFRAARFRIRK--------------- ------------------------TVRKVEKKGAGTSLGTSSAPPPKKSLNGQPGSGDWR RCAENRAVGTP-CTNGAVRQGDDEATLEVIEVHRVGNSKEHLPLPSESGSNSYAP----- ACLERK-----------NERNA-------------EA-KRKMALARERKTVKTLGIIMGT FILCWLPFFIVALVLPF-CESSC-HMPALLGAIINWLGYSNSLLNPVIYAYFNKDFQNAF KKIIK--------CKFCR------------------------------------------ ------------------------------------------------------------ ------------------------R > 34== L06803 1 Lymnaea stagnalis serotonin receptor <>[PNAS90,11-15'93] M-ANFTFGDLALDVARMGGLASTPSGLRSTGLTTPGLSPTG------------------L VTSDFNDSYGLTG-----QFINGSHSSRSRDNASAN-DTSATNMTDDRYWSLTVY----- --------SHEHLVLTSVILGLFVLCCIIGNCFVIAAVMLERSLHNVANYLILSLAVADL MVAVLV-MPLSVVSE-IS-KVWF--LHSEVCDMWISVDVLCCTASILHLVAIAMDRYWAV TS-IDYIRRRSARRILLMIMVVWIVALFI-SIPPLFG-WRDP--NN--DPDKTGTCIIS- -------QDKGYTIFSTVGAFYLPMLVMMIIYIRIWLVARSRIRKDKFQMTKARLKTEET TLVASPKTEYSVVSDCNGCNSPDSTTEKKKRRAPFKSYGCSPRPERKK------------ ----NRAKKLPENANGVNSNSSSSERLKQIQIE-----------TAEAFANGCAEEAS-I AMLERQ-CNNGKKISSNDTPYS-------------RT-REKLELKRERKAARTLAIITGA FLICWLPFFIIALIGPF-VDPE--GIPPFARSFVLWLGYFNSLLNPIIYTIFSPEFRSAF QKILF--------GKYRRG----------------------------------------- ------------------------------------------------------------ -----------------------HR > 35=p A47174 serotonin receptor, 5HTlym receptor - great pond snail M-ANFTFGDLALDVARMGGLASTPSGLRSTGLTTPGLSPTG------------------L VTSDFNDSYGLTG-----QFINGSHSSRSRDNASAN-DTSATNMTDDRYWSLTVY----- --------SHEHLVLTSVILGLFVLCCIIGNCFVIAAVMLERSLHNVANYLILSLAVADL MVAVLV-MPLSVVSE-IS-KVWF--LHSEVCDMWISVDVLCCTASILHLVAIAMDRYWAV TS-IDYIRRRSARRILLMIMVVWIVALFI-SIPPLFG-WRDP--NN--DPDKTGTCIIS- -------QDKGYTIFSTVGAFYLPMLVMMIIYIRIWLVARSRIRKDKFQMTKARLKTEET TLVASPKTEYSVVSDCNGCNSPDSTTEKKKRRAPFKSYGCSPRPERKK------------ ----NRAKKLPENANGVNSNSSSSERLKQIQIE-----------TAEAFANGCAEEAS-I AMLERQ-CNNGKKISSNDTPYS-------------RT-REKLELKRERKAARTLAIITGA FLICWLPFFIIALIGPF-VDPE--GIPPFARSFVLWLGYFNSLLNPIIYTIFSPEFRSAF QKILF--------GKYRRG----------------------------------------- ------------------------------------------------------------ -----------------------HR > 36== X95604 1 Bombyx mori serotonin receptor <antennae>[InsectBiochem.Mol.Bi M-EGAE-GQEELD----WEALYLRLPLQNCSWNSTGWEPNW------------------N VTVVPNTTW---------------------WQASAPFDTPAALVR--------------- ------------AAAKAVVLGLLILATVVGNVFVIAAILLERHLRSAANNLILSLAVADL LVACLV-MPLGAVYE-VV-QRWT--LGPELCDMWTSGDVLCCTASILHLVAIALDRYWAV TN-IDYIHASTAKRVGMMIACVWTVSFFV-CIAQLLG-WKDPDWNQRVSEDL--RCVVS- -------QDVGYQIFATASSFYVPVLIILILYWRIYQTARKRIRR--------------- ------------------------------RRGATARGGVGPPPVP-------------- -------------AGGALVAGGGSGGIAAAVVAVIGRP---LPTISETTTTGFTNVSSNN TSPEKQSCANGLEADPPTTGYGAVAAAYYPSLVRRKP-KEAADSKRERKAAKTLAIITGA FVACWLPFFVLAILVPT-CDCE---VSPVLTSLSLWLGYFNSTLNPVIYTVFSPEFRHAF QRLLC--------GRRVRRR----R----------------------------------- ------------------------------------------------------------ ----------------------APQ