view tool_dependencies.xml @ 7:bfc93db38735 draft

planemo upload for repository https://github.com/galaxyproject/dunovo commit b'7a4153c8f0f37ba6f3753d7bca8b0f566b26a1e9\n'-dirty

<?xml version="1.0"?>
<tool_dependency>
  <package name="bowtie2" version="2.2.5">
    <repository changeset_revision="f5582ac5ba3c" name="package_bowtie_2_2_5" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
  </package>
  <package name="samtools" version="0.1.18">
    <repository changeset_revision="f499719dad6e" name="package_samtools_0_1_18" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
  </package>
  <package name="mafft" version="7.221">
    <repository changeset_revision="dd4a533a0e3c" name="mafft" owner="rnateam" toolshed="https://testtoolshed.g2.bx.psu.edu" />
  </package>
  <package name="networkx" version="1.9">
    <repository changeset_revision="2ca57555a756" name="package_networkx_1_9" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
  </package>
  <package name="dunovo" version="0.7.5">
    <install version="1.0">
      <actions>
        <action sha256sum="76f6c54d4a79d9c0d2abe3efd4c23d9ba496debb3087cafecaec53fe8879474b" type="download_by_url">https://github.com/galaxyproject/dunovo/archive/v0.7.5.tar.gz</action>
        <action type="shell_command">make</action>
        <action type="move_directory_files">
          <source_directory>.</source_directory>
          <destination_directory>$INSTALL_DIR</destination_directory>
        </action>
        <action type="set_environment">
          <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR</environment_variable>
        </action>
        <!-- Note: This does not install the submodules.
        Functionality they provide will not be available. -->
      </actions>
    </install>
  </package>
</tool_dependency>