Mercurial > repos > morinlab > transform_vcf_to_counts

changeset 0:552e16f18578 draft

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Uploaded
author morinlab
date Sun, 04 Dec 2016 16:16:34 -0500
parents
children 0d9ef2618d9c
files transform_vcf_to_counts.xml
diffstat 1 files changed, 18 insertions(+), 0 deletions(-) [+]
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/transform_vcf_to_counts.xml	Sun Dec 04 16:16:34 2016 -0500
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+<tool id="transform_vcf_to_counts" name="transformVcfToCounts" version="0.0.1">
+  <description>
+    Tranform Mutationseq VCF to Counts
+  </description>
+  <command>
+    <![CDATA[
+    
+    python $__tool_directory__/transform_vcf_to_counts.py -i $input -o $output;
+
+    ]]>
+  </command>
+  <inputs>
+    <param type="data" format="vcf" name="input" label="Mutationseq VCF"/>
+  </inputs>
+  <outputs>
+    <data format="wig" name="output"/>
+  </outputs>
+</tool>