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<?xml version="1.0"?>
<tool_dependency>
	<package name="libstatgen" version="1.0.13">
		<repository changeset_revision="5178c851b7f4" name="package_libstatgen_1_0_13" owner="morinlab" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
	</package>
	<package name="bamutil" version="1.0.13">
		<install version="1.0">
			<actions>
				<action type="download_by_url">https://github.com/statgen/bamUtil/archive/v1.0.13.tar.gz</action>
				<action type="set_environment_for_install">
					<repository changeset_revision="d1a368ee18a1" name="package_libstatgen_1_0_13" owner="morinlab" toolshed="http://galaxy-morinlab.mbb.sfu.ca:9009">
						<package name="libstatgen" version="1.0.13" />
					</repository>
				</action>
				<action type="shell_command">make LIB_PATH_GENERAL=${LIBSTATGEN_INSTALL_DIR}</action>
				<action type="move_directory_files">
					<source_directory>.</source_directory>
					<destination_directory>$INSTALL_DIR</destination_directory>
				</action>
				<action type="set_environment">
					<environment_variable action="set_to" name="BAMUTIL_INSTALL_DIR">$INSTALL_DIR</environment_variable>
					<environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
				</action>
			</actions>
		</install>
	</package>
</tool_dependency>