changeset 3:abdade708cef draft

Uploaded
author morinlab
date Sun, 04 Dec 2016 14:50:56 -0500
parents eb8659c761b2
children 9d55e8e75236
files mutation_type_dictionary_file.txt
diffstat 1 files changed, 53 insertions(+), 0 deletions(-) [+]
line wrap: on
line diff
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/mutation_type_dictionary_file.txt	Sun Dec 04 14:50:56 2016 -0500
@@ -0,0 +1,53 @@
+Variant_Classification	effect
+Silent	silent
+Synonymous	silent
+Missense	nonsilent
+Missense_Mutation	nonsilent
+Nonsense	null
+Nonsense_Mutation	null
+Nonstop_Mutation	null
+Read-through	null
+Frame_Shift_Del	null
+Frame_Shift_Ins	null
+In_Frame_Del	null
+In_Frame_Ins	null
+Ins	null
+Del	null
+Splice	null
+Splice_Region	null
+Splice_Site	null
+Splice_Site_Del	null
+Splice_Site_DNP	null
+Splice_Site_Ins	null
+Splice_Site_ONP	null
+Splice_Site_SNP	null
+Start_Codon_Del	null
+Start_Codon_DNP	null
+Start_Codon_Ins	null
+Start_Codon_ONP	null
+Stop_Codon_Del	null
+Stop_Codon_DNP	null
+Stop_Codon_Ins	null
+Translation_Start_Site	null
+De_novo_Start	null
+De_novo_Start_InFrame	null
+De_novo_Start_OutOfFrame	null
+IGR	noncoding
+Intron	noncoding
+3'Flank	noncoding
+3'Promoter	noncoding
+3'UTR	noncoding
+3'-UTR	noncoding
+5'Flank	noncoding
+5'-Flank	noncoding
+5'Promoter	noncoding
+5'UTR	noncoding
+5'-UTR	noncoding
+downstream	noncoding
+miRNA	noncoding
+NCSD	noncoding
+Non-coding_Transcript	noncoding
+Promoter	noncoding
+RNA	noncoding
+upstream	noncoding
+upstream;downstream	noncoding