Mercurial > repos > moheydarian > heatmap2

changeset 9:568d2153f910 draft

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Uploaded
author moheydarian
date Tue, 14 Mar 2017 14:41:49 -0400
parents 84935e121609
children fe9d1a33f421
files heatmap2.xml
diffstat 1 files changed, 3 insertions(+), 2 deletions(-) [+]
line wrap: on
line diff
--- a/heatmap2.xml	Tue Mar 14 14:41:36 2017 -0400
+++ b/heatmap2.xml	Tue Mar 14 14:41:49 2017 -0400
@@ -8,7 +8,8 @@
         <exit_code range="1:" />
     </stdio>
     <command><![CDATA[
-        Rscript ${__tool_directory__}/heatmap2.R --input "$input1" --title "$title" --keylabel "$keylabel" 
+        Rscript ${__tool_directory__}/heatmap2.R --input "$input1" --title "$title" 
+        --key "$key" 
         --transform "$transformation.transform"
         --output "Rplot.pdf"
 
@@ -16,7 +17,7 @@
     <inputs>
         <param name="input1" type="data" format="tabular" label="Input should have column headers - these will be the columns that are plotted"/>
         <param name="title" size="30" type="text" format="txt" label="Plot title"/> 
-        <param name="keylabel" size="30" type="text" format="txt" label="key label"/> 
+        <param name="key" size="30" type="text" format="txt" label="key title"/> 
         <conditional name="transformation">
             <param name="transform" type="select" label="Advanced - log transformation">
               <option value="none">Plot the data as it is</option>