view Visualize_distrubution_of_polymorphism_docker.xml @ 2:355a869e068b draft default tip

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<tool id="Visualize_distrubution_of_polymorphism_docker" name="Visualize distribution of DNA polymorphism">
	<requirements>
	    <container type="docker">takakoron/distribution_of_dna_polymorphism</container>
	</requirements>
	<command interpreter="perl">

		/usr/src/myapp/kick_distribution_polymorphism.pl
		
		'$annotation_data'
		'$polymorphism'
		'$output1'

	</command>

	<inputs>
		<!--- input annotation data -->
		<param name="annotation_data" type="select" label="Select an annotation data" help="If your annotation of interest is not listed, contact the P-GALAXY team">">
			<options from_file="Visualize_Distrubution_of_polymorphism.loc">
				<column name="value" index="1" />
				<column name="name" index="0" />
			</options>
		</param>
		<param name="polymorphism" type="data" label="Select DNA polymorphism file(format : samtools pileup or mpileup)" />
	</inputs>

	<outputs>
		<data name="output1" format="html" />
	</outputs>

<!---
   <help>

.. class:: infomark
**About data** 

Distribution of chromosome is appeared in order of genome file.

   </help>
-->

</tool>