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view tool1.xml @ 5:c4b9451503bf draft

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planemo upload
author mingchen0919
date Sat, 28 Oct 2017 23:46:10 -0400
parents 1649c9af02cc
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<tool id="tool_template" name="tool name" version="1.0.0">
  <requirements>
    <requirement type="package" version="1.15.0.6-0">pandoc</requirement>
    <requirement type="package" version="1.20.0">r-getopt</requirement>
    <requirement type="package" version="1.3">r-rmarkdown</requirement>
    <requirement type="package" version="0.3.5">r-htmltools</requirement>
    <requirement type="package" version="0.5.0">r-dplyr</requirement>
  </requirements>
  <description>some descriptions about the tool.</description>
  <command>
                    Rscript '${__tool_directory__}/tool_template_render.R'
                        -e $echo
                        -r $report
                        -d $report.files_path
                        -s $sink_message
                        -t '${__tool_directory__}/tool_template.Rmd
                    </command>
</tool>