annotate interproscan.sh @ 5:4aa0cec3399f draft default tip

add log
author mingchen0919
date Tue, 03 Apr 2018 16:44:50 -0400
parents 59d780043157
children
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1 export TOOL_DIR='${__tool_directory__}' &&
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3 Rscript '${__tool_directory__}/'interproscan_render.R
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5 -o '$report'
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6 -d '$report.files_path'
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7 -s '$sink_message'
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8 -A '$fasta_input'
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9 -B '$output_format'
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10 -C '$disable_precalc'
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11 -D '$iprlookup'
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12 -E '$goterms'
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13 -F '$pathways'