Mercurial > repos > mingchen0919 > statonlab_interprocan

diff interproscan.sh @ 0:59d780043157 draft

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planemo upload
author mingchen0919
date Tue, 03 Apr 2018 14:30:53 -0400
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/interproscan.sh	Tue Apr 03 14:30:53 2018 -0400
@@ -0,0 +1,13 @@
+export TOOL_DIR='${__tool_directory__}' &&
+
+Rscript '${__tool_directory__}/'interproscan_render.R
+
+	-o '$report'
+	-d '$report.files_path'
+	-s '$sink_message'
+	-A '$fasta_input'
+	-B '$output_format'
+	-C '$disable_precalc'
+	-D '$iprlookup'
+	-E '$goterms'
+	-F '$pathways'