Mercurial > repos > mingchen0919 > rmarkdown_merge_rmarkdown

changeset 1:b7aa1bb07ff3 draft default tip

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author mingchen0919
date Thu, 28 Dec 2017 01:12:56 -0500
parents 2f72cbded1d1
children
files rmarkdown_merge_rmarkdown.xml
diffstat 1 files changed, 7 insertions(+), 7 deletions(-) [+]
line wrap: on
line diff
--- a/rmarkdown_merge_rmarkdown.xml	Thu Dec 28 01:08:56 2017 -0500
+++ b/rmarkdown_merge_rmarkdown.xml	Thu Dec 28 01:12:56 2017 -0500
@@ -10,15 +10,15 @@
   <stdio>
     <regex source="stderr" match="XXX" level="warning" description="Check the warnings_and_errors.txt file for more details."/>
   </stdio>
-  <command><![CDATA[                    Rscript '${__tool_directory__}/rmarkdown_merge_rmarkdown_render.R'
-                        -e $echo
-                        -r $report
-                        -d $report.files_path
-                        -s $sink_message
-                        -t '${__tool_directory__}/rmarkdown_merge_rmarkdown.Rmd'
+  <command><![CDATA[                    Rscript '${__tool_directory__}/rmarkdown_merge_rmarkdown_render.R'
+                        -e $echo
+                        -r $report
+                        -d $report.files_path
+                        -s $sink_message
+                        -t '${__tool_directory__}/rmarkdown_merge_rmarkdown.Rmd'
                     ]]></command>
   <inputs>
-    <param type="integer" name="echo" label="Display analysis code in report?" optional="False" checked="False" truevalue="TRUE" falsevalue="FALSE"/>
+    <param type="boolean" name="echo" label="Display analysis code in report?" optional="False" checked="False" truevalue="TRUE" falsevalue="FALSE"/>
     <param type="data" name="rmarkdown_files" label="R Markdown files" optional="False" format="Rmd" multiple="True"/>
   </inputs>
   <outputs>