comparison rmarkdown_feature_counts.Rmd @ 13:eb51eca6cdf1 draft

update

12:7a2369ab4f84

# Write counts into CSV file

```{r}
colnames(res$counts) = strsplit(opt$input_bam_names, ',')[[1]]
# write count into csv file
write.csv(res$counts, file = 'feature_counts.csv', row.names = TRUE)
datatable(res$counts)
```

# Save results into RData file

```{r}

13:eb51eca6cdf1

# Write counts into CSV file

```{r}
colnames(res$counts) = strsplit(opt$input_bam_names, ',')[[1]]
# write count into csv file
write.table(res$counts, file = 'feature_counts.txt')
```

Display the first 100 rows.

```{r}
datatable(head(res$counts, 100))
```

# Save results into RData file

```{r}