Mercurial > repos > mingchen0919 > rmarkdown_collection_builder

changeset 28:cde8aa76d84c draft

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planemo upload for repository https://github.com/statonlab/docker-GRReport/tree/master/my_tools/rmarkdown_collection_builder commit 436d91722b309f61890d13d7ed28cd43c79a5c74-dirty
author mingchen0919
date Mon, 25 Sep 2017 23:43:10 -0400
parents 5982d63cdeda
children bf6e2d98e280
files collection_list_paired_render.R
diffstat 1 files changed, 0 insertions(+), 3 deletions(-) [+]
line wrap: on
line diff
--- a/collection_list_paired_render.R	Mon Sep 25 23:42:32 2017 -0400
+++ b/collection_list_paired_render.R	Mon Sep 25 23:43:10 2017 -0400
@@ -73,9 +73,6 @@
     gsub('REVERSE_FILE_LIST', opt$reverse_file_list, x)
   }) %>%
   (function(x) {
-    gsub('OUTPUT_DIR', opt$list_paired_collection_dir, x)
-  }) %>%
-  (function(x) {
     fileConn = file('list_paired_collection.Rmd')
     writeLines(x, con=fileConn)
     close(fileConn)