# HG changeset patch
# User mingchen0919
# Date 1506397390 14400
# Node ID cde8aa76d84c7f6e0961324918b70d5565eb076a
# Parent  5982d63cdedae58163dc1332fbb09eecf2a0bc05
planemo upload for repository https://github.com/statonlab/docker-GRReport/tree/master/my_tools/rmarkdown_collection_builder commit 436d91722b309f61890d13d7ed28cd43c79a5c74-dirty

diff -r 5982d63cdeda -r cde8aa76d84c collection_list_paired_render.R
--- a/collection_list_paired_render.R	Mon Sep 25 23:42:32 2017 -0400
+++ b/collection_list_paired_render.R	Mon Sep 25 23:43:10 2017 -0400
@@ -73,9 +73,6 @@
     gsub('REVERSE_FILE_LIST', opt$reverse_file_list, x)
   }) %>%
   (function(x) {
-    gsub('OUTPUT_DIR', opt$list_paired_collection_dir, x)
-  }) %>%
-  (function(x) {
     fileConn = file('list_paired_collection.Rmd')
     writeLines(x, con=fileConn)
     close(fileConn)