Mercurial > repos > mingchen0919 > gtg_star_demo

changeset 2:5c9d34a8061d draft default tip

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new test
author mingchen0919
date Wed, 20 Jun 2018 13:20:43 -0400
parents 44632fc0fc15
children
files star.xml star_render.R
diffstat 2 files changed, 2 insertions(+), 2 deletions(-) [+]
line wrap: on
line diff
--- a/star.xml	Wed Jun 20 11:33:55 2018 -0400
+++ b/star.xml	Wed Jun 20 13:20:43 2018 -0400
@@ -1,4 +1,4 @@
-<tool id="aurora_star_demo" name="aurora_star_demo" version="1.0.0">
+<tool id="aurora_star" name="aurora_star_demo" version="1.0.0">
   <description>ultrafast universal RNA-Seq aligner&#xD;
     </description>
   <requirements>
--- a/star_render.R	Wed Jun 20 11:33:55 2018 -0400
+++ b/star_render.R	Wed Jun 20 13:20:43 2018 -0400
@@ -1,7 +1,7 @@
 ##============ Sink warnings and errors to a file ==============
 ## use the sink() function to wrap all code within it.
 ##==============================================================
-zz = file(paste0(Sys.getenv('REPORT_FILES_PATH'), '/rmarkdown_rendering.log.txt'))
+zz = file(paste0(Sys.getenv('REPORT_FILES_PATH'), '/.r_rendering.log.txt'))
 sink(zz)
 sink(zz, type = 'message')