Mercurial > repos > mingchen0919 > aurora_skewer

annotate expose-outputs.sh @ 8:7c9170b7d9f6 draft

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planemo upload commit 5b03cf1a31307c262701d4f267972bd01be24311
author mingchen0919
date Thu, 26 Apr 2018 13:38:15 -0400
parents c5c297020c36
children c0e57c994deb
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2c663ddb8488 planemo upload commit f0ae5255b6c75f69c85319bba8da742be83f27d2-dirty
mingchen0919
parents:
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1 # change directory to tool outputs directory
2c663ddb8488 planemo upload commit f0ae5255b6c75f69c85319bba8da742be83f27d2-dirty
mingchen0919
parents:
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2 cd ${REPORT_FILES_PATH}
2c663ddb8488 planemo upload commit f0ae5255b6c75f69c85319bba8da742be83f27d2-dirty
mingchen0919
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2c663ddb8488 planemo upload commit f0ae5255b6c75f69c85319bba8da742be83f27d2-dirty
mingchen0919
parents:
diff changeset
4 # copy outputs from tool outputs directory to corresponding galaxy output path
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7c9170b7d9f6 planemo upload commit 5b03cf1a31307c262701d4f267972bd01be24311
mingchen0919
parents: 7
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5 cp star.html ${REPORT}
7c9170b7d9f6 planemo upload commit 5b03cf1a31307c262701d4f267972bd01be24311
mingchen0919
parents: 7
diff changeset
6 cp Aligned.out.sorted.bam ${X_S}